RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 IFT52Q9Y366 437 aa17.76■□□□□ 0.43
LTBP3-210ENST00000528516 PCDHB5Q9Y5E4 795 aa17.76■□□□□ 0.43
LTBP3-210ENST00000528516 SPO11Q9Y5K1 396 aa17.76■□□□□ 0.43
LTBP3-210ENST00000528516 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
LTBP3-210ENST00000528516 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ILVBLA1L0T0 632 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CCNKO75909 580 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 AP2A1O95782 977 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 RPL17P18621 184 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 OXTRP30559 389 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CCL23P55773 120 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ARHGAP1Q07960 439 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 FRG1Q14331 258 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 INAVAQ3KP66 663 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 R3HCC1LQ7Z5L2 792 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 EPHX4Q8IUS5 362 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 MFSD2AQ8NA29 543 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 SERPINB11Q96P15 392 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 SYT17Q9BSW7 474 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ALG2Q9H553 416 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 AGO3Q9H9G7 860 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ANKMY1Q9P2S6 941 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 PPP2R3BQ9Y5P8 575 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 HS6ST1O60243 411 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ALDH1A2O94788 518 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 POLR2IP36954 125 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 SELENBP1Q13228 472 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CLPPQ16740 277 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 UGT3A1Q6NUS8 523 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 PLEKHG7Q6ZR37 379 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 GATAD2AQ86YP4 633 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 OR13F1Q8NGS4 319 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 PSMG2Q969U7 264 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CIPCQ9C0C6 399 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 H3BMM5 538 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 TBX1O43435 398 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 MLNP12872 115 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CDH5P33151 784 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CLDN10P78369 228 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 PKN3Q6P5Z2 889 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 PIWIL4Q7Z3Z4 852 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 OR7D4Q8NG98 312 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 VPS33AQ96AX1 596 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 TMEM169Q96HH4 297 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 CHID1Q9BWS9 393 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ABCC13Q9NSE7 274 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 KCTD3Q9Y597 815 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 RAD54BQ9Y620 910 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 TLL2Q9Y6L7 1015 aa17.75■□□□□ 0.43
LTBP3-210ENST00000528516 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
LTBP3-210ENST00000528516 ZNFX1Q9P2E3 1918 aaKnown RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 FAM155AB1AL88 458 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 IL4RP24394 825 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 TAF10Q12962 218 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 INTS11Q5TA45 600 aaKnown RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 GCNT7Q6ZNI0 430 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 ARMC8Q8IUR7 673 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SYTL1Q8IYJ3 562 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 ATG16L2Q8NAA4 619 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 OR4K2Q8NGD2 314 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SUN5Q8TC36 379 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 RTP4Q96DX8 246 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 ZBED3Q96IU2 234 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 BDH2Q9BUT1 245 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SEZ6LQ9BYH1 1024 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SYTL2Q9HCH5 934 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 PADI3Q9ULW8 664 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 CCRL2O00421 344 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 UGT2B4P06133 528 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 NNMTP40261 264 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 MAGEA3P43357 314 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 TIGD5Q53EQ6 642 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 AGAP7PQ5VUJ5 663 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 STEAP4Q687X5 459 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 CLEC20AQ6ZU45 233 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 GPSM1Q86YR5 675 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 PNPT1Q8TCS8 783 aaKnown RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 ARNTL2Q8WYA1 636 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 IL12RB2Q99665 862 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 C6orf62Q9GZU0 229 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 CXCL16Q9H2A7 254 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 NEK6Q9HC98 313 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 EVPLLA8MZ36 301 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 INPP1P49441 399 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 PLD1Q13393 1074 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 AASDHQ4L235 1098 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SPESP1Q6UW49 350 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 PIM3Q86V86 326 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 OSTM1Q86WC4 334 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 P3H2Q8IVL5 708 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 TUBA1CQ9BQE3 449 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 POLR1EQ9GZS1 481 aaKnown RBP17.74■□□□□ 0.43
LTBP3-210ENST00000528516 SH3BP4Q9P0V3 963 aa17.74■□□□□ 0.43
LTBP3-210ENST00000528516 A0A0J9YYE9 177 aa17.73■□□□□ 0.43
LTBP3-210ENST00000528516 UBXN8O00124 270 aa17.73■□□□□ 0.43
LTBP3-210ENST00000528516 AKR1A1P14550 325 aa17.73■□□□□ 0.43
LTBP3-210ENST00000528516 HK2P52789 917 aa17.73■□□□□ 0.43
LTBP3-210ENST00000528516 LRP8Q14114 963 aa17.73■□□□□ 0.43
LTBP3-210ENST00000528516 SYTL3Q4VX76 610 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms