RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 GALNT8Q9NY28 637 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 DTLQ9NZJ0 730 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 TRPM5Q9NZQ8 1165 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 MPP6Q9NZW5 540 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 KCMF1Q9P0J7 381 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 RCOR3Q9P2K3 495 aaPredicted RBP4.21□□□□□ -1.74
CD44-226ENST00000527889 ANAPC5Q9UJX4 755 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 VANGL2Q9ULK5 521 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 NEU3Q9UQ49 428 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.74
CD44-226ENST00000527889 ASPMQ8IZT6 3477 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CACNA1IQ9P0X4 2223 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CABIN1Q9Y6J0 2220 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 A0A1B0GVC2 190 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 A0A1W2PPL8 197 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ZC3H12DA2A288 527 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 BCLAF3A2AJT9 711 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 EPOPA6NHQ4 379 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ZNF839A8K0R7 811 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 HACD1B0YJ81 288 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ISM1B1AKI9 464 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 H3BQF6 201 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 RNF103O00237 685 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 DFFAO00273 331 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 PER2O15055 1255 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 NRP2O60462 931 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TSPAN3O60637 253 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 LPXNO60711 386 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TMEM127O75204 238 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 PPFIA2O75334 1257 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MTRF1O75570 445 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 TMEM63AO94886 807 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 BAG2O95816 211 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 OAS1P00973 400 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 IGLV3-27P01718 113 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 KITP10721 976 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 SLC2A3P11169 496 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MBL2P11226 248 aaPredicted RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 MYL4P12829 197 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TYRP14679 529 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 RAC2P15153 192 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TACR2P21452 398 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 APEX1P27695 318 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 GABRR2P28476 465 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 SLC7A1P30825 629 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 SLC6A4P31645 630 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ACTN2P35609 894 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ATP5C1P36542 298 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 HSD17B3P37058 310 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 HSPA7P48741 367 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 HCAR3P49019 387 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 NR2C2P49116 596 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CLCN4P51793 760 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 HK2P52789 917 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 BASP1P80723 227 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 NFATC3Q12968 1075 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ZBTB17Q13105 803 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TARDBPQ13148 414 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-226ENST00000527889 XRCC4Q13426 336 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 GPM6BQ13491 265 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MTM1Q13496 603 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 KCNJ11Q14654 390 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 STARD3Q14849 445 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 FASTKD3Q14CZ7 662 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 PDK1Q15118 436 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 PRKD1Q15139 912 aaPredicted RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 MPEG1Q2M385 716 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MS4A13Q5J8X5 152 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 STXBP5Q5T5C0 1151 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 RNASEH2BQ5TBB1 312 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 TXNDC8Q6A555 127 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 NADSYN1Q6IA69 706 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 FBXL22Q6P050 247 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 RFWD3Q6PCD5 774 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 C16orf54Q6UWD8 224 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ARHGEF18Q6ZSZ5 1173 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 PDZD4Q76G19 769 aaPredicted RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 BMP8AQ7Z5Y6 402 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ADGRD2Q7Z7M1 963 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ITIH5Q86UX2 942 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CHSY1Q86X52 802 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TMC8Q8IU68 726 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 SPPL2CQ8IUH8 684 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 GLB1L2Q8IW92 636 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ARHGAP12Q8IWW6 846 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 GPR65Q8IYL9 337 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ZNF683Q8IZ20 524 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CACNA2D3Q8IZS8 1091 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ABCA7Q8IZY2 2146 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 LGI2Q8N0V4 545 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 MREGQ8N565 214 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 ARL14EPQ8N8R7 260 aaPredicted RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 MRPL43Q8N983 215 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 EIF1ADQ8N9N8 165 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 ZNF527Q8NB42 609 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 CCNYQ8ND76 341 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 GDPD5Q8WTR4 605 aa4.2□□□□□ -1.74
CD44-226ENST00000527889 TFB1MQ8WVM0 346 aaKnown RBP4.2□□□□□ -1.74
CD44-226ENST00000527889 IPCEF1Q8WWN9 437 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms