RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 UBXN7O94888 489 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 PRKAR1AP10644 381 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 RPL10P27635 214 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC19A1P41440 591 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC1A1P43005 524 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 POLE2P56282 527 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 UBE2IP63279 158 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 LRRC38Q5VT99 294 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 TIPARPQ7Z3E1 657 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 PTRH1Q86Y79 214 aaKnown RBP22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC45A3Q96JT2 553 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 TTC25Q96NG3 672 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 OLFM3Q96PB7 478 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 TGM7Q96PF1 710 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 ABHD10Q9NUJ1 306 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 ZNF624Q9P2J8 865 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 TRIM10Q9UDY6 481 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 SPTA1P02549 2419 aa22.05■■□□□ 1.12
TRAPPC4-208ENST00000527680 LOC101059948A0A1B0GTJ6 334 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 SPOPO43791 374 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 IDSP22304 550 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 SEPHS1P49903 392 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 GFERP55789 205 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 GTF2H3Q13889 308 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 LLGL1Q15334 1064 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 KAZNQ674X7 775 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 MFSD7Q6UXD7 560 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 TFB1MQ8WVM0 346 aaKnown RBP22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 C9orf72Q96LT7 481 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 SPRY4Q9C004 299 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 UCK1Q9HA47 277 aa22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 SAE1Q9UBE0 346 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 ASH1LQ9NR48 2969 aaKnown RBP22.04■■□□□ 1.12
TRAPPC4-208ENST00000527680 AURKAO14965 403 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 RASSF9O75901 435 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 VCLP18206 1134 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 COMTP21964 271 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 PTPN3P26045 913 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 NR2C2P49116 596 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 ABHD18Q0P651 414 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 KCNAB2Q13303 367 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TFDP2Q14188 446 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC14A2Q15849 920 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TRAPPC5Q8IUR0 188 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TADA1Q96BN2 335 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 CXorf40BQ96DE9 158 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 RNF31Q96EP0 1072 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TEKT5Q96M29 485 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TIMM29Q9BSF4 260 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 NFKBIL1Q9UBC1 381 aaPredicted RBP22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 FAM153AQ9UHL3 310 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 TMEM184BQ9Y519 407 aaPredicted RBP22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 SPO11Q9Y5K1 396 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC30A1Q9Y6M5 507 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 BOD1L1Q8NFC6 3051 aa22.03■■□□□ 1.12
TRAPPC4-208ENST00000527680 CST8O60676 142 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 PTMSP20962 102 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 DRG2P55039 364 aaKnown RBP22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 TMEM115Q12893 351 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 C16orf46Q6P387 395 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 SLC25A41Q8N5S1 370 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 ULBP3Q9BZM4 244 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 MYO18BQ8IUG5 2567 aa22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 MN1Q10571 1320 aaPredicted RBP22.02■■□□□ 1.12
TRAPPC4-208ENST00000527680 TERTO14746 1132 aaKnown RBP22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 C9P02748 559 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 ANKRD34CP0C6C1 535 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 MC1RQ01726 317 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 DEFB109BQ30KR1 87 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 ATP13A5Q4VNC0 1218 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 ABRAXAS1Q6UWZ7 409 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 PID1Q7Z2X4 250 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 RASGRP3Q8IV61 690 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 ZNF547Q8IVP9 402 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 VSTM4Q8IW00 320 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 ESX1Q8N693 406 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 BRSK1Q8TDC3 778 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 OGFRQ9NZT2 677 aa22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 KLHL8Q9P2G9 620 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC4-208ENST00000527680 TLN1Q9Y490 2541 aaKnown RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 OR52A4PA6NMU1 304 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 F5H423 210 aaPredicted RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 TCN2P20062 427 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 HMGCLP35914 325 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 HALP42357 657 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 LEPRP48357 1165 aaKnown RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 WNT3AP56704 352 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 PRKD1Q15139 912 aaPredicted RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 KHDC1Q4VXA5 237 aaKnown RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 CACHD1Q5VU97 1274 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 ZC3H18Q86VM9 953 aaKnown RBP22■■□□□ 1.11
TRAPPC4-208ENST00000527680 P3H4Q92791 437 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 ZDHHC12Q96GR4 267 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 ELMO2Q96JJ3 720 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 VPS35Q96QK1 796 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 OR6C1Q96RD1 312 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 TRABDQ9H4I3 376 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 SLC40A1Q9NP59 571 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 POT1Q9NUX5 634 aa22■■□□□ 1.11
TRAPPC4-208ENST00000527680 PCDHB3Q9Y5E6 796 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms