RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PDIK1LQ8N165 341 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 CCL4L1Q8NHW4 92 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 HEXDCQ8WVB3 486 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 UBXN4Q92575 508 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 PWWP2AQ96N64 755 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 TTC25Q96NG3 672 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ZCCHC2Q9C0B9 1178 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ZDHHC3Q9NYG2 299 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 PRKAB1Q9Y478 270 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 PLEKHM1Q9Y4G2 1056 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 ST14Q9Y5Y6 855 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
SMPD1-202ENST00000526280 GOLGA4Q13439 2230 aaKnown RBP12.77□□□□□ -0.37
SMPD1-202ENST00000526280 IGLV3-16A0A075B6K0 115 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 KMOO15229 486 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ALPPL2P10696 532 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 MSH3P20585 1137 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 AKT1P31749 480 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ARCN1P48444 511 aaKnown RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ARL4CP56559 192 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 B4GALNT1Q00973 533 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 CBLBQ13191 982 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 GTF2H3Q13889 308 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 LRP8Q14114 963 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 TRADDQ15628 312 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 HIF1AQ16665 826 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ANKRD20A4Q4UJ75 823 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 GLE1Q53GS7 698 aaKnown RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 LYPLAL1Q5VWZ2 237 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 KIAA0930Q6ICG6 404 aaPredicted RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 CHST15Q7LFX5 561 aaPredicted RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 TAF8Q7Z7C8 310 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 LRRTM4Q86VH4 590 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ZNF547Q8IVP9 402 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 SEC14L1Q92503 715 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ART4Q93070 314 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 ARHGEF17Q96PE2 2063 aaPredicted RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 COPS8Q99627 209 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 CDC6Q99741 560 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 EBNA1BP2Q99848 306 aaKnown RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 TRIM56Q9BRZ2 755 aaKnown RBP12.76□□□□□ -0.37
SMPD1-202ENST00000526280 GSDMCQ9BYG8 508 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 SLC32A1Q9H598 525 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 GPR34Q9UPC5 381 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 DOLKQ9UPQ8 538 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 RPS6KL1Q9Y6S9 549 aa12.76□□□□□ -0.37
SMPD1-202ENST00000526280 DCHS1Q96JQ0 3298 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ZCWPW2A0A1B0GU75 182 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 DCDC2BA2VCK2 349 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CD3EAPO15446 510 aaKnown RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 SGTAO43765 313 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 BANF1O75531 89 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 USP1O94782 785 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 VAPBO95292 243 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 RALBP11234 206 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CEACAM1P13688 526 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ATP1B2P14415 290 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 PAMP19021 973 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 AK4P27144 223 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CTSCP53634 463 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CAV1Q03135 178 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ITIH4Q14624 930 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 DBN1Q16643 649 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 PROX2Q3B8N5 592 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 BBS9Q3SYG4 887 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 FASTKD1Q53R41 847 aaKnown RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 C6orf132Q5T0Z8 1188 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ZCCHC8Q6NZY4 707 aaKnown RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 TMEM220Q6QAJ8 160 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CRTC3Q6UUV7 619 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 C11orf96Q7Z7L8 435 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 IGDCC3Q8IVU1 814 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 FAM181AQ8N9Y4 354 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 SCG3Q8WXD2 468 aaKnown RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ZNF669Q96BR6 464 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CCDC97Q96F63 343 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 DCUN1D1Q96GG9 259 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 ZNF514Q96K75 400 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 NAT9Q9BTE0 207 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 BOCQ9BWV1 1114 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 CATSPERZQ9NTU4 200 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 TAAR2Q9P1P5 351 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 SLC23A2Q9UGH3 650 aa12.75□□□□□ -0.37
SMPD1-202ENST00000526280 DNMT3AQ9Y6K1 912 aaPredicted RBP12.75□□□□□ -0.37
SMPD1-202ENST00000526280 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms