RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 PWWP2AQ96N64 755 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 TTC25Q96NG3 672 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 TSPYL1Q9H0U9 437 aa20.5■□□□□ 0.87
CD44-222ENST00000526025 TCEAL2Q9H3H9 227 aaPredicted RBP20.5■□□□□ 0.87
CD44-222ENST00000526025 DNMT3AQ9Y6K1 912 aaPredicted RBP20.5■□□□□ 0.87
CD44-222ENST00000526025 GOLGA4Q13439 2230 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 OR51F1A6NGY5 319 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 PCNX2A6NKB5 2137 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 SLC30A4O14863 429 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 CD3EAPO15446 510 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 GRID2O43424 1007 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 KCNJ13O60928 360 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 OGNP20774 298 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 AKT1P31749 480 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 ELK3P41970 407 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 GRK6P43250 576 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 GNPDA1P46926 289 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 TTPAP49638 278 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 IL9RQ01113 521 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 PDIA2Q13087 525 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 TRADDQ15628 312 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 DBN1Q16643 649 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 LONRF1Q17RB8 773 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 MRNIPQ6NTE8 343 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 CES3Q6UWW8 571 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 TAS2R42Q7RTR8 314 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 RD3Q7Z3Z2 195 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 LRRTM4Q86VH4 590 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 IGDCC3Q8IVU1 814 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 SLC25A45Q8N413 288 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 DCUN1D1Q96GG9 259 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 TCF12Q99081 682 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 WDR83Q9BRX9 315 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 TIMM29Q9BSF4 260 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 DUSP23Q9BVJ7 150 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 GSDMCQ9BYG8 508 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 TMEM168Q9H0V1 697 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 FAM96AQ9H5X1 160 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 ARFGAP3Q9NP61 516 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 NLGN3Q9NZ94 848 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 ZC3H7BQ9UGR2 993 aaKnown RBP20.49■□□□□ 0.87
CD44-222ENST00000526025 MOSPD1Q9UJG1 213 aa20.49■□□□□ 0.87
CD44-222ENST00000526025 DNAH14Q0VDD8 3507 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 QSOX1O00391 747 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 KMOO15229 486 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 SDC3O75056 442 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 MTX2O75431 263 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 BANF1O75531 89 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 AP2A2O94973 939 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 NSG1P42857 185 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 CDKN1CP49918 316 aaPredicted RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 CLCNKAP51800 687 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 B4GALNT1Q00973 533 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 ILF3Q12906 894 aaKnown RBP eCLIP20.48■□□□□ 0.87
CD44-222ENST00000526025 BCL7AQ4VC05 210 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 ZNF648Q5T619 568 aaPredicted RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 RNF187Q5TA31 235 aaPredicted RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 GKN2Q86XP6 184 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 IFT20Q8IY31 132 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 RASGEF1AQ8N9B8 481 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 GABPB2Q8TAK5 448 aaPredicted RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 CALML6Q8TD86 181 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 LMX1AQ8TE12 382 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 TRIM56Q9BRZ2 755 aaKnown RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 CLPBQ9H078 707 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 UCKL1Q9NWZ5 548 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 MTRF1LQ9UGC7 380 aaKnown RBP20.48■□□□□ 0.87
CD44-222ENST00000526025 ZNHIT2Q9UHR6 403 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 CHMP2BQ9UQN3 213 aa20.48■□□□□ 0.87
CD44-222ENST00000526025 F8W8V4 182 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 PFDN6O15212 129 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 GSTM1P09488 218 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 PRSS56P0CW18 603 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 GIMD1P0DJR0 217 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 ALPPL2P10696 532 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 ATP1B2P14415 290 aaPredicted RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 GSTM4Q03013 218 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 TYSND1Q2T9J0 566 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 UAP1L1Q3KQV9 507 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 NEPROQ6NW34 567 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 UNC5AQ6ZN44 842 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 MARK2Q7KZI7 788 aaKnown RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 PIP4P1Q86T03 277 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 GATAD2AQ86YP4 633 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 ZNF547Q8IVP9 402 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 ZBED8Q8IZ13 594 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 EIF1ADQ8N9N8 165 aaKnown RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 LRRN4CLQ8ND94 238 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 OR4C6Q8NH72 309 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 LINC00615Q96LM1 132 aaPredicted RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 MARCH4Q9P2E8 410 aaPredicted RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 CDV3Q9UKY7 258 aaKnown RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 VPS9D1Q9Y2B5 631 aa20.47■□□□□ 0.87
CD44-222ENST00000526025 PCYT1BQ9Y5K3 369 aaPredicted RBP20.47■□□□□ 0.87
CD44-222ENST00000526025 TM4SF5O14894 197 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 SLU7O95391 586 aaKnown RBP20.46■□□□□ 0.87
CD44-222ENST00000526025 ANXA6P08133 673 aa20.46■□□□□ 0.87
CD44-222ENST00000526025 GSTA2P09210 222 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms