RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 OR14L1PQ8NHC6 308 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 UTP15Q8TED0 518 aaKnown RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 RRNAD1Q96FB5 475 aaKnown RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 OXNAD1Q96HP4 312 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 APOPT1Q96IL0 206 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 TRIM51Q9BSJ1 452 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 MAGIXQ9H6Y5 334 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 STK36Q9NRP7 1315 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 KLHL8Q9P2G9 620 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 HAO1Q9UJM8 370 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 GJD2Q9UKL4 321 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 INTS6Q9UL03 887 aaKnown RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 EXOGQ9Y2C4 368 aaKnown RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 AGRNO00468 2067 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 TPOP07202 933 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 GATA2P23769 480 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 ABCD1P33897 745 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 ARL1P40616 181 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 WNT5AP41221 380 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PIP4K2AP48426 406 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 RPP30P78346 268 aaKnown RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PPFIA1Q13136 1202 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 OLIG2Q13516 323 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 GBGT1Q8N5D6 347 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 ZNF611Q8N823 705 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 ZNF614Q8N883 585 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 OR2T6Q8NHC8 308 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 MRGPRDQ8TDS7 321 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PSPC1Q8WXF1 523 aaKnown RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PRMT6Q96LA8 375 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-210ENST00000525878 HARBI1Q96MB7 349 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 RTP3Q9BQQ7 232 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 SIL1Q9H173 461 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 KIF9Q9HAQ2 790 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 SLC28A3Q9HAS3 691 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 SARDHQ9UL12 918 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PCNX3Q9H6A9 2034 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 ADAMTS9Q9P2N4 1935 aa3.56□□□□□ -1.84
CSDE1-210ENST00000525878 PRR32B1ATL7 298 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 SNAP23O00161 211 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 TNFSF14O43557 240 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 TCEA3O75764 348 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 SLC8A3P57103 927 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 TLE2Q04725 743 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 BAK1Q16611 211 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 CDONQ4KMG0 1287 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 BSPRYQ5W0U4 402 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 PM20D2Q8IYS1 436 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 SLC38A9Q8NBW4 561 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 GRHL3Q8TE85 626 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 ZNRF4Q8WWF5 429 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 C18orf12Q96KH6 178 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 IWS1Q96ST2 819 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 PRKRIP1Q9H875 184 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-210ENST00000525878 VEZTQ9HBM0 779 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 SLC38A7Q9NVC3 462 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 UBA2Q9UBT2 640 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-210ENST00000525878 STK39Q9UEW8 545 aa3.55□□□□□ -1.84
CSDE1-210ENST00000525878 TSPAN4O14817 238 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 LIPFP07098 398 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 CEBPBP17676 345 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 EPHA2P29317 976 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 TLX1P31314 330 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-210ENST00000525878 VAMP2P63027 116 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 GPR68Q15743 365 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 UGP2Q16851 508 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 ASPRV1Q53RT3 343 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 TCTEX1D4Q5JR98 221 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 NSUN5P2Q63ZY6 315 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 OR1J2Q8NGS2 313 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 GTF3C6Q969F1 213 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 KIF1BPQ96EK5 621 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 MAELQ96JY0 434 aaKnown RBP3.54□□□□□ -1.84
CSDE1-210ENST00000525878 TMEM68Q96MH6 324 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 PRR34Q9NV39 138 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 TMEM184BQ9Y519 407 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-210ENST00000525878 CAPN7Q9Y6W3 813 aa3.54□□□□□ -1.84
CSDE1-210ENST00000525878 EIF3FO00303 357 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-210ENST00000525878 PLOD2O00469 737 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 CTSCP53634 463 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 RHBDL3P58872 404 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 GALNT2Q10471 571 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 PWWP2BQ6NUJ5 590 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 SLC47A1Q96FL8 570 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 PKP2Q99959 881 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 PLCXD1Q9NUJ7 323 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 COPG2Q9UBF2 871 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 CSAG2Q9Y5P2 127 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 CLIC4Q9Y696 253 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 NOTCH2Q04721 2471 aa3.53□□□□□ -1.84
CSDE1-210ENST00000525878 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 TEX13DA0A0J9YY54 714 aaPredicted RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 C1orf226A1L170 272 aa3.52□□□□□ -1.85
CSDE1-210ENST00000525878 EIF4E1BA6NMX2 242 aaKnown RBP3.52□□□□□ -1.85
CSDE1-210ENST00000525878 JRKO75564 520 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms