RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 PQBP1O60828 265 aaKnown RBP16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 SLC22A3O75751 556 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 S100BP04271 92 aaPredicted RBP16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 PSMC3P17980 439 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ATP6V1B2P21281 511 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 DIO3P55073 304 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ERVK-8P63133 956 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 IKBKEQ14164 716 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 RCAN2Q14206 197 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 TGFBIQ15582 683 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 FRA10AC1Q70Z53 315 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ADAMTSL2Q86TH1 951 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ANKFN1Q8N957 763 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 LRCH3Q96II8 777 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 SLC2A11Q9BYW1 496 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 TRIM4Q9C037 500 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 SLC52A3Q9NQ40 469 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 CCM2LQ9NUG4 571 aaPredicted RBP16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 ACTR3BQ9P1U1 418 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 VPS51Q9UID3 782 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 LZTS1Q9Y250 596 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 OR51B4Q9Y5P0 310 aa16.33■□□□□ 0.21
CCDC90B-203ENST00000525503 FXYD1O00168 92 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 HNRNPRO43390 633 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 EEDO75530 441 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 CSPG5O95196 566 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 PGLSO95336 258 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 CLPTM1O96005 669 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 BMP2P12643 396 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 SLC6A2P23975 617 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 PRDX3P30048 256 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 GSTT1P30711 240 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 RPL5P46777 297 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 EPHB3P54753 998 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 CDH18Q13634 790 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 NFYCQ13952 458 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 ARHGEF6Q15052 776 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 MTX3Q5HYI7 312 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 LCN8Q6JVE9 175 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 LYSMD3Q7Z3D4 306 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 DNAJB7Q7Z6W7 309 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 DCAF4L2Q8NA75 395 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 C19orf43Q9BQ61 176 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 HIPK3Q9H422 1215 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 CMTM6Q9NX76 183 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 ZIM2Q9NZV7 527 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 SUN2Q9UH99 717 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 ZNF225Q9UK10 706 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 FCF1Q9Y324 198 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
CCDC90B-203ENST00000525503 CCDC154A6NI56 674 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 AKAP10O43572 662 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 ZNF7P17097 686 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 IL10P22301 178 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CSKP41240 450 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CCL23P55773 120 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 MYBPC1Q00872 1141 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CAPRIN1Q14444 709 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 PTPRRQ15256 657 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 PCBP2Q15366 365 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 SPOUT1Q5T280 376 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 ATXN7L2Q5T6C5 722 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 PTRHD1Q6GMV3 140 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 ERMP1Q7Z2K6 904 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CHCHD4Q8N4Q1 142 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CANT1Q8WVQ1 401 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 NCSTNQ92542 709 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 CLPBQ9H078 707 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 NOL11Q9H8H0 719 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 DNMT3BQ9UBC3 853 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 PADI4Q9UM07 663 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 PCDHA9Q9Y5H5 950 aa16.32■□□□□ 0.2
CCDC90B-203ENST00000525503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 DHRS12A0PJE2 317 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 FAM234BA2RU67 622 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 C9JVG2 144 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 OR4F21O95013 312 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 NPPAP01160 153 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 CTPS1P17812 591 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 RPS3P23396 243 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 PSMA4P25789 261 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 MAPK8P45983 427 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 POLR2JP52435 117 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 PRMT2P55345 433 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 SH3BGRP55822 239 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 TXNL4AP83876 142 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 CREB5Q02930 508 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 RAB33AQ14088 237 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 ADRM1Q16186 407 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 NRF1Q16656 503 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 THEMIS2Q5TEJ8 643 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 LYPLAL1Q5VWZ2 237 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 NAIF1Q69YI7 327 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 HMBOX1Q6NT76 420 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 RETSATQ6NUM9 610 aa16.31■□□□□ 0.2
CCDC90B-203ENST00000525503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.21e-8■■■■■ 31.8
CCDC90B-203ENST00000525503 AMIGO2Q86SJ2 522 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms