RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LNPEPQ9UIQ6 1025 aa23.58■■□□□ 1.37
USP47-205ENST00000525257 POLHQ9Y253 713 aa23.58■■□□□ 1.37
USP47-205ENST00000525257 SPTAN1Q13813 2472 aaKnown RBP23.58■■□□□ 1.37
USP47-205ENST00000525257 TEX15Q9BXT5 2789 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 CDC14CA4D256 554 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 GPR89AB7ZAQ6 455 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 CHUKO15111 745 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 KMOO15229 486 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 TOX3O15405 576 aaPredicted RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 MTX2O75431 263 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 NTRK1P04629 796 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 GPR89BP0CG08 455 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 ZNF7P17097 686 aaPredicted RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 RPL10P27635 214 aaKnown RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 DCDC1P59894 354 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 IL11RAQ14626 422 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 ZFYVE27Q5T4F4 411 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 ALKBH5Q6P6C2 394 aaKnown RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 TRAM1L1Q8N609 369 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 TEX19Q8NA77 164 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 SYN2Q92777 582 aaPredicted RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 ZNF830Q96NB3 372 aaPredicted RBP23.57■■□□□ 1.36
USP47-205ENST00000525257 TRIB3Q96RU7 358 aa23.57■■□□□ 1.36
USP47-205ENST00000525257 OR52A4PA6NMU1 304 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 PROSCO94903 275 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 CAPZBP47756 277 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 MLLT10P55197 1068 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 IFI35P80217 286 aaPredicted RBP23.56■■□□□ 1.36
USP47-205ENST00000525257 CACHD1Q5VU97 1274 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 TCTN3Q6NUS6 607 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 FAM92BQ6ZTR7 304 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 TIMM29Q9BSF4 260 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 GPR63Q9BZJ6 419 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 POT1Q9NUX5 634 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 CTTNBP2NLQ9P2B4 639 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 TRIM10Q9UDY6 481 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 ZNF711Q9Y462 761 aa23.56■■□□□ 1.36
USP47-205ENST00000525257 A0A1W2PQJ5 194 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 SPAG6O75602 509 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 RFPL1O75677 317 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 BRAFP15056 766 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 DRG2P55039 364 aaKnown RBP23.55■■□□□ 1.36
USP47-205ENST00000525257 PPIDQ08752 370 aaKnown RBP23.55■■□□□ 1.36
USP47-205ENST00000525257 GPR18Q14330 331 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 PCSK7Q16549 785 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 KHDC1Q4VXA5 237 aaKnown RBP23.55■■□□□ 1.36
USP47-205ENST00000525257 PDPK2PQ6A1A2 396 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 IRGCQ6NXR0 463 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 ASB18Q6ZVZ8 466 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 PRSS42Q7Z5A4 293 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 TMC3Q7Z5M5 1100 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 ATCAYQ86WG3 371 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 ZNF547Q8IVP9 402 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 CPLX3Q8WVH0 158 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 TWSG1Q9GZX9 223 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 RAD18Q9NS91 495 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 NFKBIL1Q9UBC1 381 aaPredicted RBP23.55■■□□□ 1.36
USP47-205ENST00000525257 KCND3Q9UK17 655 aa23.55■■□□□ 1.36
USP47-205ENST00000525257 KRT7P08729 469 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 CCNYL3P0C7X3 344 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 FGF5P12034 268 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 DNASE1L3Q13609 305 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 ABRAXAS1Q6UWZ7 409 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 RAPGEF5Q92565 580 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 CXorf40BQ96DE9 158 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 MAGEE1Q9HCI5 957 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 SLC40A1Q9NP59 571 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 TLK1Q9UKI8 766 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 HEY1Q9Y5J3 304 aa23.54■■□□□ 1.36
USP47-205ENST00000525257 PIPSLA2A3N6 862 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 BLACEA4D250 179 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 VEGFDO43915 354 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 CDK14O94921 469 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 TIAF1O95411 115 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 BPIP17213 487 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 IDSP22304 550 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 CASP14P31944 242 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 CD97P48960 835 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 AP1B1Q10567 949 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 PPP1R3BQ86XI6 285 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 CT55Q8WUE5 264 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 KLHL6Q8WZ60 621 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 IMP4Q96G21 291 aaKnown RBP23.53■■□□□ 1.36
USP47-205ENST00000525257 ZDHHC12Q96GR4 267 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 AGAP3Q96P47 875 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 RNF157Q96PX1 679 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 PADI1Q9ULC6 663 aa23.53■■□□□ 1.36
USP47-205ENST00000525257 GOLGA6L3A6NEY3 463 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 CREG1O75629 220 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 KDELR1P24390 212 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 PMS2P54278 862 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 PPP1CAP62136 330 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 ZBED6P86452 979 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 IQCB1Q15051 598 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.52■■□□□ 1.36
USP47-205ENST00000525257 AGAP9Q5VTM2 703 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 NT5DC3Q86UY8 548 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 TRAPPC5Q8IUR0 188 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 LURAP1LQ8IV03 231 aa23.52■■□□□ 1.36
USP47-205ENST00000525257 RBM12BQ8IXT5 1001 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms