RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ATXN1LP0C7T5 689 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 EBLN1P0CF75 366 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CLUP10909 449 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 G6PDP11413 515 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 GCFC2P16383 781 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 HK1P19367 917 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 DRD5P21918 477 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ACAT1P24752 427 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 TACR1P25103 407 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 YY1P25490 414 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 U2AF2P26368 475 aaKnown RBP eCLIP4.45□□□□□ -1.7
CD44-213ENST00000525209 PBX1P40424 430 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CDKN1BP46527 198 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HTR6P50406 440 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 GATMP50440 423 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ARSFP54793 590 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PRMT2P55345 433 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SRP54P61011 504 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 IL13RA1P78552 427 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 DNAJC3Q13217 504 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SRSF5Q13243 272 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 COTL1Q14019 142 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 Q3ZCU0 254 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FSCBQ5H9T9 825 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FAM47AQ5JRC9 791 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FAM90A2PQ658T7 463 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SLFN13Q68D06 897 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PMF1Q6P1K2 205 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CASC4Q6P4E1 433 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ERICH5Q6P6B1 374 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 GALNT18Q6P9A2 607 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CLEC9AQ6UXN8 241 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HTR3DQ70Z44 454 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 NANOGNBQ7Z5D8 188 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ADIPOR2Q86V24 386 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 AMIGO3Q86WK7 504 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ZDHHC21Q8IVQ6 265 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 C4orf19Q8IY42 314 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SRRM1Q8IYB3 904 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 ARMC10Q8N2F6 343 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CLEC1AQ8NC01 280 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 NETO2Q8NC67 525 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TMIEQ8NEW7 156 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TMEM185AQ8NFB2 350 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 BBS1Q8NFJ9 593 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 OR8J1Q8NGP2 316 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FAM110DQ8TAY7 271 aaPredicted RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 TBC1D15Q8TC07 691 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ATP8B4Q8TF62 1192 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 HEXDCQ8WVB3 486 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 NPIPB3Q92617 1050 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 DPF1Q92782 380 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 CAVIN3Q969G5 261 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ST6GALNAC6Q969X2 333 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 RRNAD1Q96FB5 475 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 FAR2Q96K12 515 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ZBTB45Q96K62 511 aaPredicted RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 GPA33Q99795 319 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 H2AFJQ9BTM1 129 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 YIPF2Q9BWQ6 316 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PKIBQ9C010 78 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 TTYH3Q9C0H2 523 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FAM192AQ9GZU8 254 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 NSRP1Q9H0G5 558 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 DCTPP1Q9H773 170 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 MVB12BQ9H7P6 319 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 METTL7AQ9H8H3 244 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SRD5A3Q9H8P0 318 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 KIF9Q9HAQ2 790 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SLC6A13Q9NSD5 602 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 FAM120CQ9NX05 1096 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 TMEM161AQ9NX61 479 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PLK2Q9NYY3 685 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 KIAA1456Q9P272 454 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PTGFRNQ9P2B2 879 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 UBQLN2Q9UHD9 624 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 RAPGEFL1Q9UHV5 662 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 ZNF148Q9UQR1 794 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 SLC27A6Q9Y2P4 619 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 PMF1-BGLAPU3KQ54 211 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 MAP3K4Q9Y6R4 1608 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
CD44-213ENST00000525209 KIAA0586Q9BVV6 1533 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 KIF27Q86VH2 1401 aa4.45□□□□□ -1.7
CD44-213ENST00000525209 IQGAP2Q13576 1575 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CARMIL1Q5VZK9 1371 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MADDQ8WXG6 1647 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MAGEB16A2A368 324 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 K7EQM0 130 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 WRBO00258 174 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CYR61O00622 381 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TRIM24O15164 1050 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 KCNJ13O60928 360 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 NIPSNAP2O75323 286 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SPDEFO95238 335 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MOCS3O95396 460 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GNA14O95837 355 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SERPINA3P01011 423 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms