RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MAPK9P45984 424 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 GPR3P46089 330 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CTSCP53634 463 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PCBP4P57723 403 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 HHEXQ03014 270 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CFHR1Q03591 330 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 GPRC6AQ5T6X5 926 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 DET1Q7L5Y6 550 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 TRAPPC5Q8IUR0 188 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 RASGEF1AQ8N9B8 481 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PPP1R2P1Q96PQ5 205 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ALS2CR12Q96Q35 445 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 FAM96AQ9H5X1 160 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ASB8Q9H765 288 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 THSD1Q9NS62 852 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMEM9Q9P0T7 183 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PISDQ9UG56 409 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF148Q9UQR1 794 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PPP2R2CQ9Y2T4 447 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 LOXL2Q9Y4K0 774 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PCDHGA8Q9Y5G5 932 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 UNC13CQ8NB66 2214 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 FREM2Q5SZK8 3169 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 URB1O60287 2271 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 PRAMEF33A0A0G2JMD5 474 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 OR2AG2A6NM03 316 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 PDZK1P1A8MUH7 402 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 GPR89AB7ZAQ6 455 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 PPFIA2O75334 1257 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 CRTAMO95727 393 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 IFNB1P01574 187 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 JMJD7P0C870 316 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 GPR89BP0CG08 455 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 AKT1P31749 480 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 CSF2RBP32927 897 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ETV5P41161 510 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ABCG1P45844 678 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 FASLGP48023 281 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 DRG2P55039 364 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ERVPABLB-1P60509 514 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ITGA9Q13797 1035 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 C16orf72Q14CZ0 275 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 OASLQ15646 514 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 LDLRAP1Q5SW96 308 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMEM220Q6QAJ8 160 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF662Q6ZS27 426 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 C11orf96Q7Z7L8 435 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC9B2Q86UD5 537 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 JAMLQ86YT9 394 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 SPACA3Q8IXA5 215 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 KLHDC8BQ8IXV7 354 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF248Q8NDW4 579 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 DDHD1Q8NEL9 900 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 DTX3LQ8TDB6 740 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 LRRC45Q96CN5 670 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 AHCYL2Q96HN2 611 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 TIMM29Q9BSF4 260 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZMYND15Q9H091 742 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 LRRC40Q9H9A6 602 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ARNT2Q9HBZ2 717 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 CPNE7Q9UBL6 633 aa12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 ANKRD11Q6UB99 2663 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-205ENST00000525079 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 KIR2DS5A0A0G2JLQ3 304 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 A0A0G2JNG1 304 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 IGHV5-10-1A0A0J9YXX1 117 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CCDC78A2IDD5 438 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CDRT15L2A8MXV6 281 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 KIR2DS3K7RE56 304 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 PSMD3O43242 534 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 LDB2O43679 373 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 POP7O75817 140 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 SLC2A4P14672 509 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 BRAFP15056 766 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 MSH3P20585 1137 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 IDSP22304 550 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CXCR5P32302 372 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 CLCNKAP51800 687 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 ZNF140P52738 457 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 MAPK10P53779 464 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 XIAPP98170 497 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 SEPT6Q14141 434 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 POU6F1Q14863 301 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 KIR2DS5Q14953 304 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 KCTD19Q17RG1 926 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 P3H1Q32P28 736 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 SNAP47Q5SQN1 464 aa12.64□□□□□ -0.39
TRAPPC4-205ENST00000525079 FNBP1LQ5T0N5 605 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms