RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 FAM46DQ8NEK8 389 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SPDYE1Q8NFV5 336 aaPredicted RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 OR4L1Q8NH43 312 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 FBXO25Q8TCJ0 367 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 LKAAEAR1Q8TD35 194 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 NETO1Q8TDF5 533 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 ART4Q93070 314 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 DCUN1D1Q96GG9 259 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 ATXN7L3BQ96GX2 97 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 CNDP2Q96KP4 475 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 VPS35Q96QK1 796 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 OR2M4Q96R27 311 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SRPK1Q96SB4 655 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 COPS8Q99627 209 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 EBNA1BP2Q99848 306 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 KIFC1Q9BW19 673 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 ZDHHC5Q9C0B5 715 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 DPEP2Q9H4A9 486 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SYNDIG1Q9H7V2 258 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 ERVMER34-1Q9H9K5 563 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 XAB2Q9HCS7 855 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SARS2Q9NP81 518 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 PPANQ9NQ55 473 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 PRDM8Q9NQV8 689 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 FBXO6Q9NRD1 293 aaPredicted RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 RAD18Q9NS91 495 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 IARS2Q9NSE4 1012 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 TREX1Q9NSU2 369 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 CATSPERZQ9NTU4 200 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SCHIP1Q9P0W5 487 aaPredicted RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 GALPQ9UBC7 116 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SPASTQ9UBP0 616 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 TBC1D29Q9UFV1 150 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 CIDEBQ9UHD4 219 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 APPL1Q9UKG1 709 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 PCOLCE2Q9UKZ9 415 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 GPR34Q9UPC5 381 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC17A4Q9Y2C5 497 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 CRYL1Q9Y2S2 319 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 CFAP20Q9Y6A4 193 aaKnown RBP4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 USP34Q70CQ2 3546 aa4.54□□□□□ -1.68
CHMP4A-202ENST00000524955 PCDH15Q96QU1 1955 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 GPR179Q6PRD1 2367 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ANKRD36A6QL64 1941 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ADAMTS9Q9P2N4 1935 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PLXND1Q9Y4D7 1925 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 TRBV5-4A0A0C4DH59 114 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 LY6G6EA0A0G2JKS1 128 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM237BA0A1B0GVD1 139 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM149AA5PLN7 773 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 KRT87PA6NCN2 255 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 OR52A4PA6NMU1 304 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PDZK1P1A8MUH7 402 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 CXorf49A8MYA2 514 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 H7C0S8 307 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 TNFRSF10CO14798 259 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC30A4O14863 429 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 TM4SF5O14894 197 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 NUAK1O60285 661 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PCDHGA12O60330 932 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 CBFA2T3O75081 653 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 NIPSNAP2O75323 286 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 NDUFS3O75489 264 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM155BO75949 473 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 HAUS5O94927 633 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 TRIM16O95361 564 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 LDOC1O95751 146 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 TUBB4AP04350 444 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 IVLP07476 585 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 HOXC4P09017 264 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM153BP0C7A2 387 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 MYBL2P10244 700 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 MLNP12872 115 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ATP1B2P14415 290 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF7P17097 686 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PGAM1P18669 254 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 SAT1P21673 171 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PMLP29590 882 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PDHA2P29803 388 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 SSTR1P30872 391 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 CCR7P32248 378 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 GMPRP36959 345 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC1A2P43004 574 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 GRK6P43250 576 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 MAPK9P45984 424 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PREPP48147 710 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 RXRGP48443 463 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 PPM1FP49593 454 aaPredicted RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 EIF3BP55884 814 aaKnown RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 GPX6P59796 221 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 DAB2P98082 770 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ACVR1Q04771 509 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 ILF3Q12906 894 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 THOC5Q13769 683 aaKnown RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 GTF2H3Q13889 308 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 BOP1Q14137 746 aaKnown RBP4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 CRYMQ14894 314 aa4.53□□□□□ -1.68
CHMP4A-202ENST00000524955 SUZ12Q15022 739 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms