RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CLOCKO15516 846 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 NIPSNAP2O75323 286 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 C1RP00736 705 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 CES1P23141 567 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 TIGD2Q4W5G0 525 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 NANOGP8Q6NSW7 305 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 GPSM1Q86YR5 675 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 ESAMQ96AP7 390 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 NANOGQ9H9S0 305 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 PREBQ9HCU5 417 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 RIC8BQ9NVN3 520 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 EIF2B4Q9UI10 523 aaKnown RBP17.71■□□□□ 0.43
IKBKB-228ENST00000523517 ZFP37Q9Y6Q3 630 aaPredicted RBP17.71■□□□□ 0.43
IKBKB-228ENST00000523517 DOCK4Q8N1I0 1966 aa17.71■□□□□ 0.43
IKBKB-228ENST00000523517 OR1I1O60431 355 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 ZDHHC11BP0C7U3 371 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 CR2P20023 1033 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 IL12AP29459 219 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 SOX11P35716 441 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 EMP3P54852 163 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 OXCT1P55809 520 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 IL2P60568 153 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 PSAPL1Q6NUJ1 521 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 CLVS1Q8IUQ0 354 aaPredicted RBP17.71■□□□□ 0.42
IKBKB-228ENST00000523517 EEF1AKMT1Q8WVE0 214 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 LINC01599Q8WXQ3 324 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 LINGO1Q96FE5 620 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 SPATA17Q96L03 361 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 TDRD1Q9BXT4 1180 aaKnown RBP17.71■□□□□ 0.42
IKBKB-228ENST00000523517 INTS7Q9NVH2 962 aaKnown RBP17.71■□□□□ 0.42
IKBKB-228ENST00000523517 SMPD3Q9NY59 655 aaPredicted RBP17.71■□□□□ 0.42
IKBKB-228ENST00000523517 ASB1Q9Y576 335 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 FADS3Q9Y5Q0 445 aa17.71■□□□□ 0.42
IKBKB-228ENST00000523517 MTMR11A4FU01 709 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 E2F3O00716 465 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 KDELR3O43731 214 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 ACSL4O60488 711 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 OR4F21O95013 312 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 CLIC3O95833 236 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 LPOP22079 712 aaPredicted RBP17.7■□□□□ 0.42
IKBKB-228ENST00000523517 HTR1EP28566 365 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 CAPGP40121 348 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 RPS9P46781 194 aaKnown RBP17.7■□□□□ 0.42
IKBKB-228ENST00000523517 FAM189BP81408 668 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 EMX2Q04743 252 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 CTSL3PQ5NE16 218 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 C6orf136Q5SQH8 315 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 CCSAPQ6IQ19 270 aaPredicted RBP17.7■□□□□ 0.42
IKBKB-228ENST00000523517 DHRSXQ8N5I4 330 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 LPCAT1Q8NF37 534 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 BIRC7Q96CA5 298 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 TMEM45AQ9NWC5 275 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 CD274Q9NZQ7 290 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 FKBPLQ9UIM3 349 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
IKBKB-228ENST00000523517 HEMK1Q9Y5R4 338 aaPredicted RBP17.7■□□□□ 0.42
IKBKB-228ENST00000523517 SYNCRIPO60506 623 aaKnown RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 VNN2O95498 520 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 LDLRP01130 860 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 MC4RP32245 332 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 TTPAP49638 278 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 ABRAXAS1Q6UWZ7 409 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PROSER1Q86XN7 944 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CDYL2Q8N8U2 506 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 FNDC5Q8NAU1 212 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PROKR1Q8TCW9 393 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CD200R1Q8TD46 325 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 ISOC1Q96CN7 298 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 RPF2Q9H7B2 306 aaKnown RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 GABRQQ9UN88 632 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 H3BNC9 293 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PFDN6O15212 129 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 SNAP91O60641 907 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 NPPAP01160 153 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CD9P21926 228 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 HRH2P25021 359 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CDH4P55283 916 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 FXNQ16595 210 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CYBRD1Q53TN4 286 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 RNF19BQ6ZMZ0 732 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PATL1Q86TB9 770 aaKnown RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 ZFAND4Q86XD8 727 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 MAGEE2Q8TD90 523 aaPredicted RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 GIPC2Q8TF65 315 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 OSCP1Q8WVF1 389 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PLEKHG4BQ96PX9 1271 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PHF12Q96QT6 1004 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 ZNF382Q96SR6 550 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 NPLQ9BXD5 320 aaPredicted RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 GPR62Q9BZJ7 368 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 COMMD8Q9NX08 183 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 EBF1Q9UH73 591 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 CIDEBQ9UHD4 219 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 AGO1Q9UL18 857 aaKnown RBP17.69■□□□□ 0.42
IKBKB-228ENST00000523517 PCDHGC4Q9Y5F7 938 aa17.69■□□□□ 0.42
IKBKB-228ENST00000523517 DYTNA2CJ06 578 aa17.68■□□□□ 0.42
IKBKB-228ENST00000523517 ZNF701M0R085 212 aaPredicted RBP17.68■□□□□ 0.42
IKBKB-228ENST00000523517 RANBP1P43487 201 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms