RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 C3orf30Q96M34 536 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 WDFY2Q96P53 400 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 ZNF385AQ96PM9 386 aaKnown RBP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PCGF1Q9BSM1 259 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 SLCO5A1Q9H2Y9 848 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 GAREM1Q9H706 876 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PCDH9Q9HC56 1237 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 KRT84Q9NSB2 600 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PCDHGB1Q9Y5G3 927 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PI4KAP2A4QPH2 592 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 LIPT2A6NK58 231 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 KDM4BO94953 1096 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 MLYCDO95822 493 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 HOXC9P31274 260 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 CLCNKAP51800 687 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 GEMIN4P57678 1058 aaKnown RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 ZNF155Q12901 538 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 SNTA1Q13424 505 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 TNFAIP1Q13829 316 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 EIF4A2Q14240 407 aaKnown RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 IZUMO4Q1ZYL8 232 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 RUSC1-AS1Q66K80 236 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 CCNI2Q6ZMN8 369 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 DPPA4Q7L190 304 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 CHERPQ8IWX8 916 aaKnown RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 ANKRD52Q8NB46 1076 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 TANKQ92844 425 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 IGSF8Q969P0 613 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 BICD1Q96G01 975 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 FAM84BQ96KN1 310 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 DUX5Q96PT3 197 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 ACOX2Q99424 681 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 MAF1Q9H063 256 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 SLC28A3Q9HAS3 691 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 RANGRFQ9HD47 186 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 LTB4R2Q9NPC1 389 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 MCM9Q9NXL9 1143 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 ZNF224Q9NZL3 707 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 C1RLQ9NZP8 487 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 SIX4Q9UIU6 781 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 CPSF1Q10570 1443 aaKnown RBP5.87□□□□□ -1.47
CPNE3-206ENST00000523469 SLIT3O75094 1523 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 C4BP0C0L5 1744 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 TOGARAM1Q9Y4F4 1720 aa5.87□□□□□ -1.47
CPNE3-206ENST00000523469 ACEP12821 1306 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 MAGEA13PA6NCF6 341 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 HNRNPCL1O60812 293 aaKnown RBP5.86□□□□□ -1.47
CPNE3-206ENST00000523469 NDUFS3O75489 264 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 PMS2P2O95744 297 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 CAPN3P20807 821 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 BDKRB2P30411 391 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 CSNK2A1P68400 391 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-206ENST00000523469 ZBED6P86452 979 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 CDONQ4KMG0 1287 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 PRSS57Q6UWY2 283 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 CSNK2A3Q8NEV1 391 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 OR14L1PQ8NHC6 308 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 LMO3Q8TAP4 145 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 POMGNT1Q8WZA1 660 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 ITPAQ9BY32 194 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 SPRY4Q9C004 299 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 UBA5Q9GZZ9 404 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 PDZD7Q9H5P4 517 aa5.86□□□□□ -1.47
CPNE3-206ENST00000523469 DDX31Q9H8H2 851 aaKnown RBP5.86□□□□□ -1.47
CPNE3-206ENST00000523469 ACSS1Q9NUB1 689 aaPredicted RBP5.86□□□□□ -1.47
CPNE3-206ENST00000523469 POLR3AO14802 1390 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 USP47Q96K76 1375 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 A0A0G2JLW4 131 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 SCAMP1O15126 338 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 HCRTR2O43614 444 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 JRKO75564 520 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 LINC00271P0C7V0 271 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 ACADMP11310 421 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 MAP2K1Q02750 393 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 GRIK2Q13002 908 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 ADIPOQQ15848 244 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 SOWAHCQ53LP3 525 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 FRG2Q64ET8 278 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 DUS1LQ6P1R4 473 aaKnown RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 SARM1Q6SZW1 724 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 NAF1Q96HR8 494 aaKnown RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 IGSF21Q96ID5 467 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 C1QTNF4Q9BXJ3 329 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 HCFC1R1Q9NWW0 138 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 MALT1Q9UDY8 824 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 CORO1CQ9ULV4 474 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-206ENST00000523469 LYVE1Q9Y5Y7 322 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 LTN1O94822 1766 aa5.85□□□□□ -1.47
CPNE3-206ENST00000523469 SPATA31E1Q6ZUB1 1445 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 NSD3Q9BZ95 1437 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 PLSCR5A0PG75 271 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 DENND3A2RUS2 1198 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 MID1O15344 667 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 SLC16A5O15375 505 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 EGFP01133 1207 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 HOXB6P17509 224 aaKnown RBP5.84□□□□□ -1.47
CPNE3-206ENST00000523469 FASLGP48023 281 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 FOXM1Q08050 763 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 RGMBQ6NW40 437 aa5.84□□□□□ -1.47
CPNE3-206ENST00000523469 SPSB3Q6PJ21 355 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms