RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TSGA13Q96PP4 275 aa25.51■■□□□ 1.67
PVT1-219ENST00000523427 UCK1Q9HA47 277 aa25.51■■□□□ 1.67
PVT1-219ENST00000523427 AMACRQ9UHK6 382 aa25.51■■□□□ 1.67
PVT1-219ENST00000523427 VPS4AQ9UN37 437 aa25.51■■□□□ 1.67
PVT1-219ENST00000523427 MYO1FO00160 1098 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 MMP2P08253 660 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 ARSEP51690 589 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 CLCNKAP51800 687 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 PMS2P54278 862 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 ZFYVE27Q5T4F4 411 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 LRRTM4Q86VH4 590 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 PPP1R3BQ86XI6 285 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 CXorf40BQ96DE9 158 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 RUFY1Q96T51 708 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 ADGRE3Q9BY15 652 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 TRIM55Q9BYV6 548 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 CEP41Q9BYV8 373 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 BRD8Q9H0E9 1235 aa25.5■■□□□ 1.67
PVT1-219ENST00000523427 KMOO15229 486 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 TIAF1O95411 115 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 GPR18Q14330 331 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 NFKBIBQ15653 356 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 FAM71BQ8TC56 605 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 GLYATL1Q969I3 302 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 NAP1L5Q96NT1 182 aaPredicted RBP25.49■■□□□ 1.67
PVT1-219ENST00000523427 LHX9Q9NQ69 397 aa25.49■■□□□ 1.67
PVT1-219ENST00000523427 TOX3O15405 576 aaPredicted RBP25.48■■□□□ 1.67
PVT1-219ENST00000523427 FGF5P12034 268 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 BRAFP15056 766 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 CAPZBP47756 277 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 PPP1CAP62136 330 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 RPS18P62269 152 aaKnown RBP25.48■■□□□ 1.67
PVT1-219ENST00000523427 TYRO3Q06418 890 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 SLC10A2Q12908 348 aaPredicted RBP25.48■■□□□ 1.67
PVT1-219ENST00000523427 CHAF1BQ13112 559 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 KCNAB1Q14722 419 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 PCSK7Q16549 785 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 CCDC183Q5T5S1 534 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 FAM199XQ6PEV8 388 aaPredicted RBP25.48■■□□□ 1.67
PVT1-219ENST00000523427 TTC30BQ8N4P2 665 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 ZDHHC12Q96GR4 267 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 ZSCAN5AQ9BUG6 496 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 GPR63Q9BZJ6 419 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 ACTL8Q9H568 366 aa25.48■■□□□ 1.67
PVT1-219ENST00000523427 AKIRIN1Q9H9L7 192 aaPredicted RBP25.48■■□□□ 1.67
PVT1-219ENST00000523427 CDK14O94921 469 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 MX2P20592 715 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 IDSP22304 550 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 ANO6Q4KMQ2 910 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 FHL5Q5TD97 284 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 PRSS42Q7Z5A4 293 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 TRAM1L1Q8N609 369 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 SLC40A1Q9NP59 571 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 POT1Q9NUX5 634 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 PLEKHB1Q9UF11 243 aaPredicted RBP25.47■■□□□ 1.67
PVT1-219ENST00000523427 RARRES3Q9UL19 164 aa25.47■■□□□ 1.67
PVT1-219ENST00000523427 CHUKO15111 745 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 MT-ND3P03897 115 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 CYP1A2P05177 515 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 ZBTB17Q13105 803 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 TUBB3Q13509 450 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.46■■□□□ 1.67
PVT1-219ENST00000523427 KHDC1Q4VXA5 237 aaKnown RBP25.46■■□□□ 1.67
PVT1-219ENST00000523427 PWWP2BQ6NUJ5 590 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 ABRAXAS1Q6UWZ7 409 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 PQLC3Q8N755 202 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 CNTD1Q8N815 330 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 SIDT2Q8NBJ9 832 aaKnown RBP25.46■■□□□ 1.67
PVT1-219ENST00000523427 GDAP1Q8TB36 358 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 CPT1CQ8TCG5 803 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 KLHL6Q8WZ60 621 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 FATE1Q969F0 183 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 ZNF670Q9BS34 389 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 NAT10Q9H0A0 1025 aaKnown RBP25.46■■□□□ 1.67
PVT1-219ENST00000523427 PDE7BQ9NP56 450 aa25.46■■□□□ 1.67
PVT1-219ENST00000523427 FOLR1P15328 257 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 NELFEP18615 380 aaKnown RBP25.45■■□□□ 1.66
PVT1-219ENST00000523427 CCL11P51671 97 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 TAS2R40P59535 323 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 SEMA5AQ13591 1074 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 NADK2Q4G0N4 442 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 CPZQ66K79 652 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 HGSNATQ68CP4 663 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 TRAPPC5Q8IUR0 188 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 ZNF547Q8IVP9 402 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 MAP7D3Q8IWC1 876 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 HDAC11Q96DB2 347 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 ZNF830Q96NB3 372 aaPredicted RBP25.45■■□□□ 1.66
PVT1-219ENST00000523427 TIMM29Q9BSF4 260 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 BPIFA1Q9NP55 256 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 WDR37Q9Y2I8 494 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 ZNF711Q9Y462 761 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 PCDHGA6Q9Y5G7 932 aa25.45■■□□□ 1.66
PVT1-219ENST00000523427 TNRC6AQ8NDV7 1962 aaKnown RBP25.45■■□□□ 1.66
PVT1-219ENST00000523427 IGHV5-51A0A0C4DH38 117 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 GPR89AB7ZAQ6 455 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 GPR89BP0CG08 455 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 PDK2Q15119 407 aa25.44■■□□□ 1.66
PVT1-219ENST00000523427 CAPRIN2Q6IMN6 1127 aaKnown RBP25.44■■□□□ 1.66
PVT1-219ENST00000523427 CERS6Q6ZMG9 384 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms