RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 LIPIQ6XZB0 460 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FAM47EQ6ZV65 393 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 USP45Q70EL2 814 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CYS1Q717R9 158 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 NLRP9Q7RTR0 991 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 KANSL1Q7Z3B3 1105 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 TSPAN33Q86UF1 283 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 PARGQ86W56 976 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SLC26A11Q86WA9 606 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CNTD1Q8N815 330 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ENDOVQ8N8Q3 282 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 BANPQ8N9N5 519 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 FBXO36Q8NEA4 188 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 LPCAT1Q8NF37 534 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 ARRDC2Q8TBH0 407 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SAP25Q8TEE9 199 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SLC44A1Q8WWI5 657 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 QKIQ96PU8 341 aaKnown RBP eCLIP6.78□□□□□ -1.326e-7■■□□□ 13.3
SPIDR-218ENST00000522222 SMIM14Q96QK8 99 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 MCCC1Q96RQ3 725 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 NAT9Q9BTE0 207 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 TSSK1BQ9BXA7 367 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 TDRD1Q9BXT4 1180 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 XAB2Q9HCS7 855 aaKnown RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 STOML1Q9UBI4 398 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 CHKBQ9Y259 395 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 STK38LQ9Y2H1 464 aa6.78□□□□□ -1.32
SPIDR-218ENST00000522222 COL5A1P20908 1838 aaPredicted RBP6.78□□□□□ -1.32
SPIDR-218ENST00000522222 A0A0U1RQS6 177 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 SPTY2D1-AS1A0A0U1RR47 76 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 A0A1W2PQ67 120 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CAPN8A6NHC0 703 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 GOLGA8CPA6NN73 597 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 COPEO14579 308 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 BIRC5O15392 142 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 LZTS3O60299 673 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 FZD6O60353 706 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PIAS2O75928 621 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 RECQL5O94762 991 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PRLP01236 227 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PDHA1P08559 390 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 SNRPAP09012 282 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 ALPIP09923 528 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 FTH1P19P0C7X4 201 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CYP2A6P11509 494 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 NME1P15531 152 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CTPS1P17812 591 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PTPN3P26045 913 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 GCKP35557 465 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CD86P42081 329 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 ARFIP2P53365 341 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 GPX6P59796 221 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 POLR2LP62875 67 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MRPS35P82673 323 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MGAT5Q09328 741 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 WASHC5Q12768 1159 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 FOXC1Q12948 553 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 BNIP3Q12983 259 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 EIF2B5Q13144 721 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MTM1Q13496 603 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PDE1CQ14123 709 aaPredicted RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 KCNJ11Q14654 390 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 SUZ12Q15022 739 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 BBS9Q3SYG4 887 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 ZNF542PQ5EBM4 170 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 DARS2Q6PI48 645 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MACC1Q6ZN28 852 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 DBX2Q6ZNG2 339 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 OTOAQ7RTW8 1153 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 HSD11B1LQ7Z5J1 315 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CLNKQ7Z7G1 428 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 GLRX5Q86SX6 157 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 ZC3H18Q86VM9 953 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 LRRC6Q86X45 466 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 C4orf33Q8N1A6 199 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PELI3Q8N2H9 469 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 TCP10LQ8TDR4 215 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 ACMSDQ8TDX5 336 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MZB1Q8WU39 189 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 DCAKDQ8WVC6 231 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 TFB1MQ8WVM0 346 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 PIH1D2Q8WWB5 315 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 MCUR1Q96AQ8 359 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 NUS1Q96E22 293 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 STAMBPL1Q96FJ0 436 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 DTD2Q96FN9 168 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 IMP4Q96G21 291 aaKnown RBP6.77□□□□□ -1.33
SPIDR-218ENST00000522222 COQ10AQ96MF6 247 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 C7orf26Q96N11 449 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 AGAP3Q96P47 875 aa6.77□□□□□ -1.33
SPIDR-218ENST00000522222 CDC6Q99741 560 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms