RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 TAOK1Q7L7X3 1001 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 CROCCP2Q86T23 111 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 PIM3Q86V86 326 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 CEP97Q8IW35 865 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 TMEM145Q8NBT3 493 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 DENND6BQ8NEG7 585 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 CADM4Q8NFZ8 388 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 LKAAEAR1Q8TD35 194 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 SCG3Q8WXD2 468 aaKnown RBP13.23□□□□□ -0.29
CLK4-210ENST00000522136 PGM2Q96G03 612 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 TRIM39Q9HCM9 518 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 EIF2B4Q9UI10 523 aaKnown RBP13.23□□□□□ -0.29
CLK4-210ENST00000522136 NOVA2Q9UNW9 492 aaKnown RBP13.23□□□□□ -0.29
CLK4-210ENST00000522136 VPS9D1Q9Y2B5 631 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 MED16Q9Y2X0 877 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 VWA7Q9Y334 891 aa13.23□□□□□ -0.29
CLK4-210ENST00000522136 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 OR2AG2A6NM03 316 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 PRAMEF26H0Y7S4 382 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 TPP1O14773 563 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 SGTAO43765 313 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 RFPL1O75677 317 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 ASMTLO95671 621 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 PYGLP06737 847 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 ATP1B2P14415 290 aaPredicted RBP13.22□□□□□ -0.29
CLK4-210ENST00000522136 CREB1P16220 341 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 CNTFP26441 200 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 CTSCP53634 463 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 TNFAIP8L3Q5GJ75 292 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 TPRG1LQ5T0D9 272 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 PTRHD1Q6GMV3 140 aaKnown RBP13.22□□□□□ -0.29
CLK4-210ENST00000522136 TRABD2AQ86V40 505 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 SRRM1Q8IYB3 904 aaKnown RBP13.22□□□□□ -0.29
CLK4-210ENST00000522136 BEND7Q8N7W2 519 aaPredicted RBP13.22□□□□□ -0.29
CLK4-210ENST00000522136 FOXJ1Q92949 421 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 CCDC68Q9H2F9 335 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
CLK4-210ENST00000522136 PCYT1BQ9Y5K3 369 aaPredicted RBP13.22□□□□□ -0.29
CLK4-210ENST00000522136 MEI4A8MW99 385 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PHGDHO43175 533 aaKnown RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 HRO43593 1189 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 RHOBTB1O94844 696 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 CDK14O94921 469 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 TRIM16O95361 564 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 ESR1P03372 595 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 MT-ND3P03897 115 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 ZNF8P17098 575 aaPredicted RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLK4-210ENST00000522136 TEAD1P28347 426 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 PPM1JQ5JR12 505 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 GOLGA6L1Q8N7Z2 621 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 SLC6A18Q96N87 628 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 SLC30A3Q99726 388 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 SNX15Q9NRS6 342 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PHPT1Q9NRX4 125 aaPredicted RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 GNPTGQ9UJJ9 305 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PRKAB1Q9Y478 270 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 TMEM202A6NGA9 273 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 CFAP99D6REC4 459 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 H3BQF6 201 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 DNAJC6O75061 913 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 FUCA1P04066 466 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PYGBP11216 843 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 RALBP11234 206 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 MYCLP1P12525 358 aaPredicted RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 CHRM3P20309 590 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 CD27P26842 260 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 TYK2P29597 1187 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PFN3P60673 137 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PPARDQ03181 441 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 ANGPT1Q15389 498 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 FAM45BPQ6NSW5 357 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 TMEM220Q6QAJ8 160 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 LAYNQ6UX15 382 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 MACC1Q6ZN28 852 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 TIFABQ6ZNK6 161 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 Q6ZSR6 202 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 C4orf33Q8N1A6 199 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 OR13H1Q8NG92 308 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 FAM45AQ8TCE6 357 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 GAB3Q8WWW8 586 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 MTBPQ96DY7 904 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 ATP6V1G3Q96LB4 118 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 MIR1-1HGQ9H1L0 117 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 PCED1AQ9H1Q7 454 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 SARS2Q9NP81 518 aaKnown RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 AASDHPPTQ9NRN7 309 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
CLK4-210ENST00000522136 PCDHB1Q9Y5F3 818 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 HS3ST3A1Q9Y663 406 aa13.21□□□□□ -0.29
CLK4-210ENST00000522136 SPAG17Q6Q759 2223 aa13.21□□□□□ -0.3
CLK4-210ENST00000522136 SP9P0CG40 484 aa13.2□□□□□ -0.3
CLK4-210ENST00000522136 FDXRP22570 491 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms