RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MACC1Q6ZN28 852 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PAGE2Q7Z2X7 111 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 MYO19Q96H55 970 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 APOLD1Q96LR9 279 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 HAPLN2Q9GZV7 340 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 IPPKQ9H8X2 491 aa13.72□□□□□ -0.21
SYNPO-205ENST00000522122 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
SYNPO-205ENST00000522122 SLC9A3R1O14745 358 aaPredicted RBP13.71□□□□□ -0.21
SYNPO-205ENST00000522122 STK16O75716 305 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 MT-ND1P03886 318 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SLC6A2P23975 617 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CYP4F2P78329 520 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SPIBQ01892 262 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CYP4F3Q08477 520 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 INCA1Q0VD86 236 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CACUL1Q86Y37 369 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 GATAD2AQ86YP4 633 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 OR52B2Q96RD2 323 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SPATA5L1Q9BVQ7 753 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 ELOVL7A1L3X0 281 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 C1RP00736 705 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 UROSP10746 265 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 THRBP10828 461 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CDH3P22223 829 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 DNAJB1P25685 340 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 WNT7BP56706 349 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CACTIN-AS1Q8N1I8 211 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 RTP4Q96DX8 246 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CYTH4Q9UIA0 394 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SPATA2Q9UM82 520 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 MYH11P35749 1972 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 TACR2P21452 398 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 GPR1P46091 355 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SOWAHAQ2M3V2 549 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.21
SYNPO-205ENST00000522122 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.71□□□□□ -0.21
SYNPO-205ENST00000522122 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 PPP1R14BQ96C90 147 aa13.71□□□□□ -0.21
SYNPO-205ENST00000522122 DNAJC1Q96KC8 554 aaKnown RBP13.71□□□□□ -0.21
SYNPO-205ENST00000522122 NR2F1P10589 423 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 CXCR3P49682 368 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 GHRHRQ02643 423 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 PTSQ03393 145 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 RBM4BQ9BQ04 359 aaKnown RBP13.71□□□□□ -0.22
SYNPO-205ENST00000522122 TTPALQ9BTX7 342 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 RBM4Q9BWF3 364 aaKnown RBP13.71□□□□□ -0.22
SYNPO-205ENST00000522122 FAIM2Q9BWQ8 316 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 COQ10BQ9H8M1 238 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 SIX4Q9UIU6 781 aa13.71□□□□□ -0.22
SYNPO-205ENST00000522122 CAPN15O75808 1086 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 GM2AP17900 193 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 XRCC1P18887 633 aaPredicted RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CLCN2P51788 898 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 PARP8Q8N3A8 854 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 NTAN1Q96AB6 310 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 PPP1R16AQ96I34 528 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 WDR12Q9GZL7 423 aaKnown RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 OR10H3O60404 316 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 ASLP04424 464 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 NDST2P52849 883 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 SIM2Q14190 667 aaPredicted RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 GNA13Q14344 377 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 STEAP4Q687X5 459 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 BHLHB9Q6PI77 547 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CYS1Q717R9 158 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 ADAMTS6Q9UKP5 1117 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CNOT6Q9ULM6 557 aaKnown RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CAPN14A8MX76 684 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 DNAJA2O60884 412 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 UGT2B11O75310 529 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 H6PDO95479 791 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 IL6P05231 212 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 MTTPP55157 894 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 RAET1GQ6H3X3 334 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CRTC3Q6UUV7 619 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 SLC39A8Q9C0K1 460 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 CXorf21Q9HAI6 301 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 ASAH2Q9NR71 780 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF624Q9P2J8 865 aaPredicted RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 LYVE1Q9Y5Y7 322 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 UBXN8O00124 270 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 PIP5K1BO14986 540 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
SYNPO-205ENST00000522122 GNA12Q03113 381 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 MCFD2Q8NI22 146 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms