RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MR1Q95460 341 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 OTULINQ96BN8 352 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 VMP1Q96GC9 406 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 JAKMIP1Q96N16 626 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 NEK1Q96PY6 1258 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 HGH1Q9BTY7 390 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 TUBB2BQ9BVA1 445 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 NUP85Q9BW27 656 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 EBF3Q9H4W6 596 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 DNAJC18Q9H819 358 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 NOL11Q9H8H0 719 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 XAB2Q9HCS7 855 aaKnown RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 ARGLU1Q9NWB6 273 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 C1RLQ9NZP8 487 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 IL17BQ9UHF5 180 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 FRMD4BQ9Y2L6 1034 aa3.4□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A087WV48 116 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 C5orf60A6NFR6 353 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 KDM4EB2RXH2 506 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 INAFM1C9JVW0 142 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRIM77I1YAP6 450 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 J3QR06 171 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 CLIC2O15247 247 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TBCAO75347 108 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZFYP08048 801 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 OR52Z1P0C646 297 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 LINGO3P0C6S8 592 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TGFB3P10600 412 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 NAGAP17050 411 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 KELP23276 732 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 OAS2P29728 719 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 ALDH7A1P49419 539 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 SNAPC1Q16533 368 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 LETM2Q2VYF4 491 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 DCST1Q5T197 706 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 RNASEH2BQ5TBB1 312 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 MORN5Q5VZ52 161 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 NHLRC1Q6VVB1 395 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 CNGA4Q8IV77 575 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 WDR20Q8TBZ3 569 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 CORO2AQ92828 525 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPACA9Q96E40 222 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 DDOQ99489 341 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TMEM79Q9BSE2 394 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPRTNQ9H040 489 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZWILCHQ9H900 591 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 CNOT10Q9H9A5 744 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 C17orf75Q9HAS0 396 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRPV4Q9HBA0 871 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 IL36RNQ9UBH0 155 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 STK39Q9UEW8 545 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 RASAL2Q9UJF2 1139 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 DBNLQ9UJU6 430 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 AGO1Q9UL18 857 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 TTC7AQ9ULT0 858 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 B3GALT5Q9Y2C3 310 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 SRPRBQ9Y5M8 271 aaKnown RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZFP37Q9Y6Q3 630 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 ABCC9O60706 1549 aa3.39□□□□□ -1.87
HMGN1P28-201ENST00000521340 IGLV5-39A0A0G2JS06 123 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A1B0GVT2 93 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 OR2M5A3KFT3 312 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 DNM1LO00429 736 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 ANKRD28O15084 1053 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 NDUFS4O43181 175 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPINT2O43291 252 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPRY3O43610 288 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 SYNCRIPO60506 623 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 CAMTA2O94983 1202 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRUB2O95900 331 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 FGBP02675 491 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 ATP5BP06576 529 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 KCNA5P22460 613 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 DNASE1P24855 282 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 BDKRB2P30411 391 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 CTNNA1P35221 906 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 TCF7P36402 384 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 RFX2P48378 723 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 RAB28P51157 221 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 MRPS21P82921 87 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 RBPJQ06330 500 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 RALGDSQ12967 914 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PTPRCAPQ14761 206 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PTGR1Q14914 329 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 AMZ1Q400G9 498 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 C6orf136Q5SQH8 315 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 ARMC4Q5T2S8 1044 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 C6orf163Q5TEZ5 329 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 LRCH2Q5VUJ6 765 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 FIGLAQ6QHK4 219 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 IQCHQ86VS3 1027 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 METTL23Q86XA0 190 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 CEP57L1Q8IYX8 460 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF34Q8IZ26 560 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 GPATCH11Q8N954 259 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 TBC1D16Q8TBP0 767 aa3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 MRPS27Q92552 414 aaKnown RBP3.38□□□□□ -1.87
HMGN1P28-201ENST00000521340 PTP4A1Q93096 173 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms