RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 B4GAT1O43505 415 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 HADHAP40939 763 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 GRIA1P42261 906 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 CTSCP53634 463 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 OR1D5P58170 312 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 CDH17Q12864 832 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 IYDQ6PHW0 289 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 C11orf96Q7Z7L8 435 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 DNAAF3Q8N9W5 541 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 GRAMD1AQ96CP6 724 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 PRDM8Q9NQV8 689 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 ATXN7L1Q9ULK2 861 aaPredicted RBP20.35■□□□□ 0.85
TRIM35-203ENST00000521253 TTC7AQ9ULT0 858 aaPredicted RBP20.35■□□□□ 0.85
TRIM35-203ENST00000521253 DNAJC16Q9Y2G8 782 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 MYLKQ15746 1914 aa20.35■□□□□ 0.85
TRIM35-203ENST00000521253 LAMA5O15230 3695 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 PRR19A6NJB7 356 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 APRTP07741 180 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 F3P13726 295 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 MSNP26038 577 aaKnown RBP20.34■□□□□ 0.85
TRIM35-203ENST00000521253 ALDH4A1P30038 563 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 AKT1P31749 480 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 FASLGP48023 281 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 KCTD19Q17RG1 926 aaPredicted RBP20.34■□□□□ 0.85
TRIM35-203ENST00000521253 PPP1R21Q6ZMI0 780 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 MICALCLQ6ZW33 695 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 B3GNT8Q7Z7M8 397 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 COG1Q8WTW3 980 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 OSBPL9Q96SU4 736 aa20.34■□□□□ 0.85
TRIM35-203ENST00000521253 NLE1Q9NVX2 485 aaPredicted RBP20.34■□□□□ 0.85
TRIM35-203ENST00000521253 A0A1W2PNU3 283 aaPredicted RBP20.33■□□□□ 0.85
TRIM35-203ENST00000521253 MROH6A6NGR9 719 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 AGAP14A8MT82 685 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 MPOP05164 745 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 MSH3P20585 1137 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 ITGALP20701 1170 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 MC4RP32245 332 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 GPR3P46089 330 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 AMZ1Q400G9 498 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 CCDC38Q502W7 563 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 TMEM220Q6QAJ8 160 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 C4orf22Q6V702 233 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 SNX20Q7Z614 316 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 STYXQ8WUJ0 223 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 AP1M1Q9BXS5 423 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 FOXP3Q9BZS1 431 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 FAM96AQ9H5X1 160 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 CASS4Q9NQ75 786 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 SMARCAL1Q9NZC9 954 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 CRLS1Q9UJA2 301 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 PYCARDQ9ULZ3 195 aa20.33■□□□□ 0.85
TRIM35-203ENST00000521253 DSPP15924 2871 aaKnown RBP20.33■□□□□ 0.84
TRIM35-203ENST00000521253 ACACAQ13085 2346 aa20.33■□□□□ 0.84
TRIM35-203ENST00000521253 CACNA1BQ00975 2339 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 KIR2DS5A0A0G2JLQ3 304 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 A0A0G2JNG1 304 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 CCDC78A2IDD5 438 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 OR2AG2A6NM03 316 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SRRM3A6NNA2 597 aaPredicted RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 H7C0S8 307 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 KIR2DS3K7RE56 304 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 PGRMC1O00264 195 aaKnown RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 BRINP1O60477 761 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SLC2A4P14672 509 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 GABREP78334 506 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 KIR2DS5Q14953 304 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 TTC27Q6P3X3 843 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 DET1Q7L5Y6 550 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 TMPRSS9Q7Z410 1059 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 ZNF761Q86XN6 746 aaPredicted RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 NXPE1Q8N323 547 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 NAT14Q8WUY8 206 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 ULK4Q96C45 1275 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SGF29Q96ES7 293 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 CCDC97Q96F63 343 aaPredicted RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 CDKN2AIPNLQ96HQ2 116 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SARS2Q9NP81 518 aaKnown RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SCHIP1Q9P0W5 487 aaPredicted RBP20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SNX12Q9UMY4 172 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SATB2Q9UPW6 733 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 SLC30A1Q9Y6M5 507 aa20.32■□□□□ 0.84
TRIM35-203ENST00000521253 OR5K4A6NMS3 321 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 PDZK1P1A8MUH7 402 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 ZW10O43264 779 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 POP7O75817 140 aaKnown RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 GAS8O95995 478 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 VCLP18206 1134 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 PSMA3P25788 255 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 CD1CP29017 333 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 LSSP48449 732 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 CDKN1CP49918 316 aaPredicted RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 INHBCP55103 352 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 BASP1P80723 227 aaKnown RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 HHEXQ03014 270 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 GSE1Q14687 1217 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 TRIP13Q15645 432 aaPredicted RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 SEPT7Q16181 437 aaKnown RBP20.31■□□□□ 0.84
TRIM35-203ENST00000521253 C3orf38Q5JPI3 329 aa20.31■□□□□ 0.84
TRIM35-203ENST00000521253 FNBP1LQ5T0N5 605 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms