RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TCHHQ07283 1943 aa3.27□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLTCL1P53675 1640 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 IL16Q14005 1332 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 EVPLQ92817 2033 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 FRMD3A2A2Y4 597 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 DENND3A2RUS2 1198 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 EME2A4GXA9 379 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 SRRM3A6NNA2 597 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 VGLL3A8MV65 326 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 HMGB1P1B2RPK0 211 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZBTB11O95625 1053 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PPP1R3DO95685 299 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PMS2P2O95744 297 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 EGFP01133 1207 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 HIST1H2ABP04908 130 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 LINC00271P0C7V0 271 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 HIST1H2ADP20671 130 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAPK4P31152 587 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PSMB10P40306 273 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 UBA7P41226 1012 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 DRG2P55039 364 aaKnown RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 TAS2R40P59535 323 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 GABPB1Q06547 395 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ACSM2AQ08AH3 577 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 SNTA1Q13424 505 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 SF3B4Q15427 424 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 KLHL40Q2TBA0 621 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF585BQ52M93 769 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 GKAP1Q5VSY0 366 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ACSM2BQ68CK6 577 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ITPRIPL1Q6GPH6 555 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 CAPRIN2Q6IMN6 1127 aaKnown RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 TRNP1Q6NT89 227 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 RGMBQ6NW40 437 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 HIST3H2AQ7L7L0 130 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 C16orf82Q7Z2V1 217 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 TSPAN33Q86UF1 283 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 TTC39CQ8N584 583 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 WDTC1Q8N5D0 677 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PCDH20Q8N6Y1 951 aaKnown RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 KCNH5Q8NCM2 988 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 LILRB1Q8NHL6 650 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 DNAAF4Q8WXU2 420 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 APBB2Q92870 758 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 TAAR8Q969N4 342 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 MOAP1Q96BY2 351 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ORAI1Q96D31 301 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ADGRG7Q96K78 797 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 FAM84BQ96KN1 310 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 CSF3RQ99062 836 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1QTNF1Q9BXJ1 281 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 VPS33BQ9H267 617 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 SMARCAD1Q9H4L7 1026 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 GAREM1Q9H706 876 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 DDX31Q9H8H2 851 aaKnown RBP3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1RLQ9NZP8 487 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR14J1Q9UGF5 321 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 AMDHD2Q9Y303 409 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 CHD1O14646 1710 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPHKAPQ2M3C7 1700 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 ADGRL1O94910 1474 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 MROH1Q8NDA8 1641 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAP3K4Q9Y6R4 1608 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 CKAP5Q14008 2032 aa3.26□□□□□ -1.89
HMGB1P41-201ENST00000520234 PNPLA6Q8IY17 1366 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 ADGRB1O14514 1584 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 EVC2Q86UK5 1308 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 EFCAB6Q5THR3 1501 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CEP152O94986 1710 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 NEO1Q92859 1461 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KANSL1LA0AUZ9 987 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1orf226A1L170 272 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CDRT15L2A8MXV6 281 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PTGES3LE9PB15 166 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 M0QZ24 198 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 AP3D1O14617 1153 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 HS3ST1O14792 307 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 VILLO15195 856 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 MID1O15344 667 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 SLC16A5O15375 505 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KCNN4O15554 427 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 HS6ST1O60243 411 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 DOK2O60496 412 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KDM4BO94953 1096 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR2C1O95371 312 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 SRPRAP08240 638 aaKnown RBP3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PLA2G2AP14555 144 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PTMSP20962 102 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PDLIM4P50479 330 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLCN3P51790 818 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 GALCP54803 685 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CDH8P55286 799 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KRTAP10-5P60370 271 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PDE1BQ01064 536 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 LMOD3Q0VAK6 560 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 GRSF1Q12849 480 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms