RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 FSD1LQ9BXM9 530 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SLC2A11Q9BYW1 496 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 NUF2Q9BZD4 464 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 FOXQ1Q9C009 403 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SIK2Q9H0K1 926 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 GSTO2Q9H4Y5 243 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TFB2MQ9H5Q4 396 aaKnown RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 WDR55Q9H6Y2 383 aaPredicted RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 ZNF696Q9H7X3 374 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 WDR41Q9HAD4 459 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 MAN1C1Q9NR34 630 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 INTS10Q9NVR2 710 aaKnown RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 LMCD1Q9NZU5 365 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SPATA7Q9P0W8 599 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TMEM181Q9P2C4 612 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ATXN10Q9UBB4 475 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CD300AQ9UGN4 299 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SFMBT1Q9UHJ3 866 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 VWA7Q9Y334 891 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PCDHB5Q9Y5E4 795 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ANAPC1Q9H1A4 1944 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 LOC100653049A0A140TA62 436 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 SMIM31A0A1B0GVY4 71 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 E2F8A0AVK6 867 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 GOLGA8TH3BQL2 631 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 AURKAO14965 403 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MSI1O43347 362 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 KLK8O60259 260 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 B4GALT3O60512 393 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 DNAJA2O60884 412 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 RNASEH1O60930 286 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 VPS4BO75351 444 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PMPCBO75439 489 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 RPP40O75818 363 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 KRT34O76011 436 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SORBS2O94875 1100 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 MATN4O95460 622 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 BAG2O95816 211 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 EFEMP2O95967 443 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 POMCP01189 267 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 JUNP05412 331 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 ASGR1P07306 291 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PRR35P0CG20 571 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SMIM18P0DKX4 95 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 HAPLN1P10915 354 aaPredicted RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 CD1EP15812 388 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CD1DP15813 335 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 XRCC1P18887 633 aaPredicted RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 CR2P20023 1033 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 KCNA5P22460 613 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PEX2P28328 305 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MAPK1P28482 360 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CDC25CP30307 473 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 AVPR1AP37288 418 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 THPOP40225 353 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CCR10P46092 362 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 NUDT2P50583 147 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SLC12A2P55011 1212 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 AQP4P55087 323 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PSME3P61289 254 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 HERVK_113P63132 956 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MS4A2Q01362 244 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 FOXM1Q08050 763 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SLC10A7Q0GE19 358 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SREBF2Q12772 1141 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CRHR2Q13324 411 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 MED21Q13503 144 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 FLOT2Q14254 428 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TRIM25Q14258 630 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 ZNF460Q14592 562 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 INPP5AQ14642 412 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 KCNA10Q16322 511 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 UGT3A2Q3SY77 523 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 UNC50Q53HI1 259 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ALFQ53S48 1182 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ZNF789Q5FWF6 425 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 NOMO2Q5JPE7 1267 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 SIRPB2Q5JXA9 342 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 CLLU1OSQ5K130 101 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PPM1LQ5SGD2 360 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ZNF678Q5SXM1 525 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 RARS2Q5T160 578 aaKnown RBP5.02□□□□□ -1.61
SDC2-204ENST00000519914 RASIP1Q5U651 963 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TMEM198Q66K66 360 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 RGMBQ6NW40 437 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 FBXL22Q6P050 247 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PRMT9Q6P2P2 845 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 KLHDC10Q6PID8 442 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 GLB1LQ6UWU2 654 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 TMEM207Q6UWW9 146 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 RNF165Q6ZSG1 346 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ISCA2Q86U28 154 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 PHYKPLQ8IUZ5 450 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 IQCF2Q8IXL9 164 aa5.02□□□□□ -1.61
SDC2-204ENST00000519914 ST13P4Q8IZP2 240 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms