RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 KRT35Q92764 455 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 USP7Q93009 1102 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 LRRC45Q96CN5 670 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 NUDT22Q9BRQ3 303 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 DDX56Q9NY93 547 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 PLEKHM1Q9Y4G2 1056 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
TRAPPC9-206ENST00000519482 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 IGHV1OR21-1A0A087WYE8 117 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 IGHV5-10-1A0A0J9YXX1 117 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 C9orf172C9J069 976 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 KCNK1O00180 336 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 APOL1O14791 398 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 INPP4BO15327 924 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 EFSO43281 561 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 DNAJC6O75061 913 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 DR1Q01658 176 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 AP1B1Q10567 949 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZBTB17Q13105 803 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 PDK1Q15118 436 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 TGIF1Q15583 401 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 SLC14A2Q15849 920 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 USP53Q70EK8 1073 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 MARK2Q7KZI7 788 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZNF605Q86T29 641 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 SFRP1Q8N474 314 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 CNTD1Q8N815 330 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 OR4D9Q8NGE8 314 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 SLCO2A1Q92959 643 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 ERP44Q9BS26 406 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 BRD8Q9H0E9 1235 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 KCNK4Q9NYG8 393 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZNHIT2Q9UHR6 403 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 CNOT6Q9ULM6 557 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 EFR3BQ9Y2G0 817 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 PCDHB11Q9Y5F2 797 aa12.33□□□□□ -0.44
TRAPPC9-206ENST00000519482 C3orf70A6NLC5 250 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 FADS2P1A8MWK0 482 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 PPP1R12AO14974 1030 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 SLC2A4P14672 509 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 CARSP49589 748 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 GLIPR1L2Q4G1C9 344 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 ODF2Q5BJF6 829 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 MANEAQ5SRI9 462 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 KIAA1614Q5VZ46 1190 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 TMEM71Q6P5X7 295 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 XKR5Q6UX68 686 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 CHST15Q7LFX5 561 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 RCBTB1Q8NDN9 531 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 SLC37A2Q8TED4 501 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 GRK7Q8WTQ7 553 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 SGF29Q96ES7 293 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 IMP4Q96G21 291 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 MED8Q96G25 268 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 CCDC74BQ96LY2 380 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 TAAR9Q96RI9 348 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 TRIB3Q96RU7 358 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 DDX47Q9H0S4 455 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 TSPYL1Q9H0U9 437 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZFYVE1Q9HBF4 777 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 RAD18Q9NS91 495 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 OAS3Q9Y6K5 1087 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-206ENST00000519482 OR5K4A6NMS3 321 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 AGRPO00253 132 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 NUAK1O60285 661 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 KRT1P04264 644 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 THRAP10827 490 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 CCL4P13236 92 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 CSTF2P33240 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 DCDC1P59894 354 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 LY6DQ14210 128 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 GALNT3Q14435 633 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 CCNG2Q16589 344 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 NKAIN2Q5VXU1 208 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 DUPD1Q68J44 220 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 PDPK2PQ6A1A2 396 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 BZW1Q7L1Q6 419 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 LYSMD3Q7Z3D4 306 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
TRAPPC9-206ENST00000519482 PRELID2Q8N945 189 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms