RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 VCLP18206 1134 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 SPRP35270 261 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 HSD17B3P37058 310 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 GP5P40197 560 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 SKIV2L2P42285 1042 aaKnown RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 SLC1A2P43004 574 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 RXRGP48443 463 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 CD151P48509 253 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 ARRB1P49407 418 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 CSNK1EP49674 416 aaKnown RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 SERPINB9P50453 376 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 SRP54P61011 504 aaKnown RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 HNRNPKP61978 463 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLN8-203ENST00000518780 PPARDQ03181 441 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 CTBP1Q13363 440 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 FZD2Q14332 565 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 ENPP7Q6UWV6 458 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 TAOK1Q7L7X3 1001 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 STRA8Q7Z7C7 330 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 LRRTM4Q86VH4 590 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 GSPT2Q8IYD1 628 aaKnown RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 PELI3Q8N2H9 469 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 UBLCP1Q8WVY7 318 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 LPGAT1Q92604 370 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 MYOCQ99972 504 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 LGR4Q9BXB1 951 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 ROPN1BQ9BZX4 212 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 OR2AG1Q9H205 316 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 P2RY12Q9H244 342 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 EPB41L4BQ9H329 900 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 RHOJQ9H4E5 214 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 ROPN1Q9HAT0 212 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 CAPN10Q9HC96 672 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 LATS2Q9NRM7 1088 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 TMEM74BQ9NUR3 256 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 MARCH4Q9P2E8 410 aaPredicted RBP9.36□□□□□ -0.91
CLN8-203ENST00000518780 ATXN10Q9UBB4 475 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 KLQ9UEF7 1012 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 GNPTGQ9UJJ9 305 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 GMEB2Q9UKD1 530 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 ANKRD6Q9Y2G4 727 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 ANKRD36A6QL64 1941 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
CLN8-203ENST00000518780 EXOC1LA0A1B0GW35 172 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 PRSS38A1L453 326 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 TMEM202A6NGA9 273 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 GOLGA8KD6RF30 607 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 GOLGA8TH3BQL2 631 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 KHNYNO15037 678 aaKnown RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 GRID2O43424 1007 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 DNAJC6O75061 913 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 KRT38O76015 456 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 INHBAP08476 426 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 PKMP14618 531 aaKnown RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 NME1P15531 152 aaKnown RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 H2AFXP16104 143 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 ZNF8P17098 575 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 MPLP40238 635 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 CTSKP43235 329 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 MSH2P43246 934 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 PRLHRP49683 370 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 CDKN1CP49918 316 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 CLCNKAP51800 687 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 HK3P52790 923 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 B4GALNT1Q00973 533 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 DNAJC3Q13217 504 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 SEMA3AQ14563 771 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 PYCR3Q53H96 274 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 BEND6Q5SZJ8 279 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 PTRHD1Q6GMV3 140 aaKnown RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 CAPN12Q6ZSI9 719 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 CCDC91Q7Z6B0 441 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 ZC3HC1Q86WB0 502 aaKnown RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 TDRPQ86YL5 185 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 GALNT13Q8IUC8 556 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 DENND6AQ8IWF6 608 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 UNC5BQ8IZJ1 945 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 SLC22A18ASQ8N1D0 253 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 RIBC1Q8N443 379 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 FSTL5Q8N475 847 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 BEND7Q8N7W2 519 aaPredicted RBP9.35□□□□□ -0.91
CLN8-203ENST00000518780 PPM1NQ8N819 430 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 RASGEF1AQ8N9B8 481 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 SLC44A1Q8WWI5 657 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 KCNJ9Q92806 393 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 MTBPQ96DY7 904 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 VPS39Q96JC1 886 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 BIRC8Q96P09 236 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 TIMM29Q9BSF4 260 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 MCMBPQ9BTE3 642 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 TMEM109Q9BVC6 243 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 SLC13A1Q9BZW2 595 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 CA5BQ9Y2D0 317 aa9.35□□□□□ -0.91
CLN8-203ENST00000518780 TMEM98Q9Y2Y6 226 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms