RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LRRC31Q6UY01 552 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 RD3Q7Z3Z2 195 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 ARHGAP22Q7Z5H3 698 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 TAF8Q7Z7C8 310 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 NLGN4XQ8N0W4 816 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 PELI3Q8N2H9 469 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 CCDC89Q8N998 374 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 NLGN4YQ8NFZ3 816 aaPredicted RBP6□□□□□ -1.45
PABPC1-207ENST00000518716 OR56A4Q8NGH8 313 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 CXorf40AQ8TE69 158 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 SIGLEC10Q96LC7 697 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 WRAP53Q9BUR4 548 aaKnown RBP6□□□□□ -1.45
PABPC1-207ENST00000518716 RSRP1Q9BUV0 290 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 LGR4Q9BXB1 951 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 ZYG11BQ9C0D3 744 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 NOL6Q9H6R4 1146 aaKnown RBP6□□□□□ -1.45
PABPC1-207ENST00000518716 MRPL40Q9NQ50 206 aaKnown RBP6□□□□□ -1.45
PABPC1-207ENST00000518716 PRDM8Q9NQV8 689 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 SLC39A1Q9NY26 324 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 UTP6Q9NYH9 597 aaKnown RBP6□□□□□ -1.45
PABPC1-207ENST00000518716 TMEM9Q9P0T7 183 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 CFAP45Q9UL16 551 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 MYRFQ9Y2G1 1151 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 COQ6Q9Y2Z9 468 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 PCNX1Q96RV3 2341 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 SPG11Q96JI7 2443 aa6□□□□□ -1.45
PABPC1-207ENST00000518716 IGHV1OR21-1A0A087WYE8 117 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TRIM49BA6NDI0 452 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 OVOL3O00110 214 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 IFRD1O00458 451 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 INSIG1O15503 277 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 KDELR3O43731 214 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 SORBS2O94875 1100 aaKnown RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 CCDC175P0C221 793 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 PRKAR1AP10644 381 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 CCNB1P14635 433 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 ELAVL4P26378 380 aaKnown RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TNFRSF8P28908 595 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MMP12P39900 470 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 STAT1P42224 750 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 KIR3DL1P43629 444 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 GABRB2P47870 512 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MC1RQ01726 317 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 PLP2Q04941 152 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 RALGDSQ12967 914 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 RAPGEF1Q13905 1077 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 UGP2Q16851 508 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 AMZ1Q400G9 498 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MAP9Q49MG5 647 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 INO80DQ53TQ3 878 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 DCAF12Q5T6F0 453 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 ZNF658Q5TYW1 1059 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 C1QL3Q5VWW1 255 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 NKAIN2Q5VXU1 208 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TMEM71Q6P5X7 295 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MAMDC2Q7Z304 686 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 ZDHHC17Q8IUH5 632 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TRIM59Q8IWR1 403 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 CCDC13Q8IYE1 715 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 UNC5BQ8IZJ1 945 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 CBARPQ8N350 705 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TTC30BQ8N4P2 665 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TEX19Q8NA77 164 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 GOLM1Q8NBJ4 401 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 STARD8Q92502 1023 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 HMCESQ96FZ2 354 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TEFMQ96QE5 360 aaKnown RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TBCBQ99426 244 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 DPYSL5Q9BPU6 564 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 EFHD1Q9BUP0 239 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 BDH2Q9BUT1 245 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TTYH3Q9C0H2 523 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TGIF2Q9GZN2 237 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 GOLPH3LQ9H4A5 285 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 DPEP2Q9H4A9 486 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 GPN2Q9H9Y4 310 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 MLXIPLQ9NP71 852 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 FBXO8Q9NRD0 319 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 TMEM248Q9NWD8 314 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 AKAP7Q9P0M2 348 aaPredicted RBP5.99□□□□□ -1.45
PABPC1-207ENST00000518716 ZNF69Q9UC07 566 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 CNTRLQ7Z7A1 2325 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 PKDREJQ9NTG1 2253 aa5.99□□□□□ -1.45
PABPC1-207ENST00000518716 PDZD2O15018 2839 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 ADGRG4Q8IZF6 3080 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 MED13LQ71F56 2210 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 ANKRD36A6QL64 1941 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 FITM1A5D6W6 292 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 EFCAB7A8K855 629 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 B4DGG1 531 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 FAM72CH0Y354 149 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 THAP12O43422 761 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 BUB1BO60566 1050 aaPredicted RBP5.98□□□□□ -1.45
PABPC1-207ENST00000518716 SRGAP2O75044 1071 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 MTA2O94776 668 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 TMCC1O94876 653 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 ZNF202O95125 648 aa5.98□□□□□ -1.45
PABPC1-207ENST00000518716 LDLRP01130 860 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms