RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 CBX8Q9HC52 389 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 BPIFA1Q9NP55 256 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 UBP1Q9NZI7 540 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SEMA5BQ9P283 1151 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RCOR3Q9P2K3 495 aaPredicted RBP8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IP6K2Q9UHH9 426 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TUBD1Q9UJT1 453 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TLK1Q9UKI8 766 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TTLL3Q9Y4R7 772 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SCINQ9Y6U3 715 aa8.14□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PDZD2O15018 2839 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 GOLGA6L3A6NEY3 463 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LILRA5A6NI73 299 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 F5H423 210 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MASP2O00187 686 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 POLR1CO15160 346 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 BUD23O43709 281 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SPAG6O75602 509 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CAPN1P07384 714 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CTSBP07858 339 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TPM2P07951 284 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CCDC172P0C7W6 258 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PECAM1P16284 738 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF7P17097 686 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF165P49910 485 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FOXL2P58012 376 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FANCCQ00597 558 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 WASHC5Q12768 1159 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MSLNQ13421 630 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IL10RAQ13651 578 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KRT81Q14533 505 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IFI16Q16666 785 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CCDC122Q5T0U0 273 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SLC9A4Q6AI14 798 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 DUS1LQ6P1R4 473 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KDELC1Q6UW63 502 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ABRAXAS1Q6UWZ7 409 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FAM92BQ6ZTR7 304 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CCDC13Q8IYE1 715 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SPDYE1Q8NFV5 336 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CT55Q8WUE5 264 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 GLYATL1Q969I3 302 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 HDAC11Q96DB2 347 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 OXNAD1Q96HP4 312 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 OR6C1Q96RD1 312 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF670Q9BS34 389 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MLPHQ9BV36 600 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 GOLPH3Q9H4A6 298 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF768Q9H5H4 540 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TRIM39Q9HCM9 518 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MRPL47Q9HD33 250 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IL26Q9NPH9 171 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KCTD5Q9NXV2 234 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CAPN11Q9UMQ6 739 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF711Q9Y462 761 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KCTD3Q9Y597 815 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TNRC6AQ8NDV7 1962 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KIR2DS5A0A0G2JLQ3 304 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 A0A0G2JNG1 304 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 A0A1W2PQJ5 194 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 BLACEA4D250 179 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KIR2DS3K7RE56 304 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MYO1FO00160 1098 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 HCRTR1O43613 425 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SEMA7AO75326 666 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 UBXN7O94888 489 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SLC25A14O95258 325 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LCA5LO95447 670 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NTRK1P04629 796 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SERPING1P05155 500 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KRT7P08729 469 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SFTPCP11686 197 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FGF5P12034 268 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SERPINB6P35237 376 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 DLSTP36957 453 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CAPZBP47756 277 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MARCKSL1P49006 195 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 EPHB1P54762 984 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 EPHA4P54764 986 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RAB15P59190 212 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FOXM1Q08050 763 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KIR2DS5Q14953 304 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CHRNA6Q15825 494 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TAZQ16635 292 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NADK2Q4G0N4 442 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF789Q5FWF6 425 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MFSD7Q6UXD7 560 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CEACAM20Q6UY09 585 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LRRC49Q8IUZ0 686 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RASGEF1AQ8N9B8 481 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 Q8NA96 180 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KCTD6Q8NC69 237 aa8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 APOBEC4Q8WW27 367 aaKnown RBP8.12□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SYN2Q92777 582 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms