RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 INSCQ1MX18 579 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TBC1D25Q3MII6 688 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AMZ1Q400G9 498 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CRTC3Q6UUV7 619 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 C4orf22Q6V702 233 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SLC9B2Q86UD5 537 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 DDHD1Q8NEL9 900 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SLC37A2Q8TED4 501 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LIN37Q96GY3 246 aaPredicted RBP11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SLC46A1Q96NT5 459 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SLC38A3Q99624 504 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 DPYSL5Q9BPU6 564 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ASB8Q9H765 288 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SARS2Q9NP81 518 aaKnown RBP11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 THSD1Q9NS62 852 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 KCNK4Q9NYG8 393 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SLC23A2Q9UGH3 650 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CFAP47Q6ZTR5 3102 aa11.05□□□□□ -0.64
SCARNA16.1-201ENST00000516133 A0A087WV48 116 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 KLHL33A6NCF5 533 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 A6NCN8 305 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AGAP14A8MT82 685 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 GAPDHSO14556 408 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CASC3O15234 703 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 RRP8O43159 456 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LDB2O43679 373 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 EML2O95834 649 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 RALBP11234 206 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TPH1P17752 444 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 XRCC1P18887 633 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 MSH3P20585 1137 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 IDSP22304 550 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 MSNP26038 577 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CD1CP29017 333 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LMAN1P49257 510 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 PDX1P52945 283 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 HHEXQ03014 270 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ZFP36L1Q07352 338 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 NFATC2Q13469 925 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LAMB3Q13751 1172 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SKIDA1Q1XH10 827 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 GPR33Q49SQ1 333 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 KHDC1Q4VXA5 237 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 C3orf38Q5JPI3 329 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 GPRC6AQ5T6X5 926 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ABRAXAS1Q6UWZ7 409 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 WASH2PQ6VEQ5 465 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 USP53Q70EK8 1073 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 RAB11FIP2Q7L804 512 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AMZ2Q86W34 360 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TRAPPC5Q8IUR0 188 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ZNF547Q8IVP9 402 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 RASGEF1AQ8N9B8 481 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 DNAAF3Q8N9W5 541 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SNIP1Q8TAD8 396 aaKnown RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 HEXDCQ8WVB3 486 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ULK4Q96C45 1275 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CMKLR1Q99788 373 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 FOXP3Q9BZS1 431 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 OSGEPL1Q9H4B0 414 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ETNK1Q9HBU6 452 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 EPB41L5Q9HCM4 733 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 WASH6PQ9NQA3 447 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 PRDM8Q9NQV8 689 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AKAP7Q9P0M2 348 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 PAK5Q9P286 719 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ATXN7L1Q9ULK2 861 aaPredicted RBP11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SATB2Q9UPW6 733 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 KCTD3Q9Y597 815 aa11.04□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ZFC3H1O60293 1989 aaKnown RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 IGHV1OR21-1A0A087WYE8 117 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 H7C0S8 307 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 PLD2O14939 933 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 POP7O75817 140 aaKnown RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SUN1O94901 812 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 ITGALP20701 1170 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AKT1P31749 480 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CXCR5P32302 372 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 EIF2S3P41091 472 aaKnown RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 XIAPP98170 497 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 CDH17Q12864 832 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SIX1Q15475 284 aaPredicted RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 MAP9Q49MG5 647 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 AGAP9Q5VTM2 703 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TMEM220Q6QAJ8 160 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 LRRC69Q6ZNQ3 347 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 SNX20Q7Z614 316 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 C11orf96Q7Z7L8 435 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 B3GNT8Q7Z7M8 397 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 FBXO39Q8N4B4 442 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 BEND7Q8N7W2 519 aaPredicted RBP11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 OR13C4Q8NGS5 318 aa11.03□□□□□ -0.64
SCARNA16.1-201ENST00000516133 OR10G6Q8NH81 332 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms