RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ATG9AQ7Z3C6 839 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SPATA21Q7Z572 469 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SPRED1Q7Z699 444 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 TMEM173Q86WV6 379 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 NRROSQ86YC3 692 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 FAM219AQ8IW50 185 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 FOXRED2Q8IWF2 684 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SFRP1Q8N474 314 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 DBF4BQ8NFT6 615 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SPATA20Q8TB22 786 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 TBC1D16Q8TBP0 767 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 HASPINQ8TF76 798 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 ZFAND2BQ8WV99 257 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 ROBO4Q8WZ75 1007 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 LARP4BQ92615 738 aaKnown RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 OTULINQ96BN8 352 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 ERLEC1Q96DZ1 483 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 RMDN2Q96LZ7 410 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 CAMK1GQ96NX5 476 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 MS4A10Q96PG2 267 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SLC22A12Q96S37 553 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 WDR77Q9BQA1 342 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 UTP14AQ9BVJ6 771 aaKnown RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 CACNG6Q9BXT2 260 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 POLDIP3Q9BY77 421 aaKnown RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SPRY4Q9C004 299 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 TMEM39BQ9GZU3 492 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 RAD21L1Q9H4I0 556 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 THAP9Q9H5L6 903 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 FLRT1Q9NZU1 646 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 AKAP7Q9P0M2 348 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 ARPP21Q9UBL0 812 aaPredicted RBP4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 HEY2Q9UBP5 337 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 STK39Q9UEW8 545 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 RAPGEFL1Q9UHV5 662 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 SLC24A2Q9UI40 661 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
RNU6-488P-201ENST00000515918 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 B4DGG1 531 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 INO80B-WBP1J3KQ70 363 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 J3QR06 171 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ASAP2O43150 1006 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 NDUFS4O43181 175 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ZBTB14O43829 449 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 TLR2O60603 784 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ATG13O75143 517 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 RTN2O75298 545 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 DDNO94850 711 aaPredicted RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 PNPP00491 289 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CTSAP10619 480 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CHRNB2P17787 502 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CD58P19256 250 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 GPTP24298 496 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SLC12A3P55017 1021 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ASIC1P78348 528 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 HSPB3Q12988 150 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CBX3Q13185 183 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MELKQ14680 651 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MVPQ14764 893 aaKnown RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 EFNB3Q15768 340 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MEP1AQ16819 746 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 DUSP6Q16828 381 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SYT16Q17RD7 645 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 HFEQ30201 348 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SUMO4Q6EEV6 95 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SLC27A1Q6PCB7 646 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MOXD1Q6UVY6 613 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CNTN4Q8IWV2 1026 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 KLHL7Q8IXQ5 586 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ENGASEQ8NFI3 743 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 BBS10Q8TAM1 723 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ATP6V0A1Q93050 837 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 ST6GALNAC6Q969X2 333 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MUS81Q96NY9 551 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SH3GL2Q99962 352 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 C16orf70Q9BSU1 422 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 FAM234AQ9H0X4 552 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 TMEM206Q9H813 350 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 CLK4Q9HAZ1 481 aaKnown RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 PDGFCQ9NRA1 345 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 KLHL13Q9P2N7 655 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 MOSPD1Q9UJG1 213 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 LEF1Q9UJU2 399 aaPredicted RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 TTC7AQ9ULT0 858 aaPredicted RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 TMEM184BQ9Y519 407 aaPredicted RBP4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.74
RNU6-488P-201ENST00000515918 SMIM30A4D0T7 59 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 TMEM221A6NGB7 291 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 TMEM189-UBE2V1I3L0A0 370 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 TO15178 435 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 ST8SIA3O43173 380 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 LDB2O43679 373 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 TLX3O43711 291 aaPredicted RBP4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 SLC4A1P02730 911 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 INHBAP08476 426 aa4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 PCP11498 1178 aaKnown RBP4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 DDX5P17844 614 aaKnown RBP4.2□□□□□ -1.74
RNU6-488P-201ENST00000515918 GNAZP19086 355 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms