RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 LSMEM2Q8N112 164 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 CLDN19Q8N6F1 224 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 ERP27Q96DN0 273 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 PHF21BQ96EK2 531 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 CCDC97Q96F63 343 aaPredicted RBP19.89■□□□□ 0.77
TRIO-223ENST00000515710 TMEM237Q96Q45 408 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 ACOX2Q99424 681 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 EML4Q9HC35 981 aaKnown RBP19.89■□□□□ 0.77
TRIO-223ENST00000515710 FBRSL1Q9HCM7 1045 aaKnown RBP19.89■□□□□ 0.77
TRIO-223ENST00000515710 SPATS2LQ9NUQ6 558 aaKnown RBP19.89■□□□□ 0.77
TRIO-223ENST00000515710 ZFP69BQ9UJL9 534 aa19.89■□□□□ 0.77
TRIO-223ENST00000515710 BTN3A1O00481 513 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 AREL1O15033 823 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TRIM16O95361 564 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 OR56A5P0C7T3 313 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 ADRB3P13945 408 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 DGKAP23743 735 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 ACOX1Q15067 660 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TSNQ15631 228 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 GPRC6AQ5T6X5 926 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 ERN2Q76MJ5 926 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 MMAAQ8IVH4 418 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 SCAMP4Q969E2 229 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 RAB7BQ96AH8 199 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 SKA1Q96BD8 255 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TRMOQ9BU70 441 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 HDAC8Q9BY41 377 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 ABCG8Q9H221 673 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TMPRSS11EQ9UL52 423 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 APOBEC2Q9Y235 224 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 BPTFQ12830 3046 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 PRRC2BQ5JSZ5 2229 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 ANKRD65E5RJM6 399 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 CDC7O00311 574 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 WNT9AO14904 365 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 MAGEC1O60732 1142 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 MTHFD2P13995 350 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 SERPINB3P29508 390 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 SOX9P48436 509 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 LIG3P49916 1009 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 METAP1P53582 386 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 B4GALNT1Q00973 533 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TTLL9Q3SXZ7 439 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 TMEM52BQ4KMG9 183 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 ZNF678Q5SXM1 525 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 CYP2U1Q7Z449 544 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 KIRREL3Q8IZU9 778 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 FUBP1Q96AE4 644 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 MOCOSQ96EN8 888 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 DCUN1D1Q96GG9 259 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 COQ10AQ96MF6 247 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 VPS35Q96QK1 796 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 RIOK2Q9BVS4 552 aaKnown RBP19.88■□□□□ 0.77
TRIO-223ENST00000515710 TRPV5Q9NQA5 729 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 VTI1BQ9UEU0 232 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 SLC12A4Q9UP95 1085 aa19.88■□□□□ 0.77
TRIO-223ENST00000515710 CFAP99D6REC4 459 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 UBXN8O00124 270 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 ZNF195O14628 629 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 HGSO14964 777 aaPredicted RBP19.87■□□□□ 0.77
TRIO-223ENST00000515710 SPINT1O43278 529 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 NAA20P61599 178 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 HERVK_113P63132 956 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 CHPFQ8IZ52 775 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 ZBTB2Q8N680 514 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 ZNF513Q8N8E2 541 aaPredicted RBP19.87■□□□□ 0.77
TRIO-223ENST00000515710 LKAAEAR1Q8TD35 194 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 RILPQ96NA2 401 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 ERVK-6Q9BXR3 956 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 IKZF3Q9UKT9 509 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 ITM2BQ9Y287 266 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 MYO9BQ13459 2157 aa19.87■□□□□ 0.77
TRIO-223ENST00000515710 NPEPPSL1A6NEC2 478 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 CCDC22O60826 627 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 ATP5HO75947 161 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 AP2A2O94973 939 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 CBSLP0DN79 551 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 ATP1B2P14415 290 aaPredicted RBP19.86■□□□□ 0.77
TRIO-223ENST00000515710 ITGB6P18564 788 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 MPSTP25325 297 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 CBSP35520 551 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 SCTRP47872 440 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 AAK1Q2M2I8 961 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 SPRED3Q2MJR0 410 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 FRMD7Q6ZUT3 714 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 ZNF765Q7L2R6 523 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 MICALL1Q8N3F8 863 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 PTGR2Q8N8N7 351 aaPredicted RBP19.86■□□□□ 0.77
TRIO-223ENST00000515710 DDHD1Q8NEL9 900 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 EXT2Q93063 718 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 DTD2Q96FN9 168 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 ASB2Q96Q27 587 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 KCTD5Q9NXV2 234 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 ZDHHC2Q9UIJ5 367 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 SUPT3HB4E1H0 165 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 K7EQS6 105 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 MATN2O00339 956 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 KLK8O60259 260 aa19.86■□□□□ 0.77
TRIO-223ENST00000515710 RNASEH1O60930 286 aaKnown RBP19.86■□□□□ 0.77
TRIO-223ENST00000515710 SUPT3HO75486 399 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms