RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 TROAPQ12815 778 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 GAGE1Q13065 139 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 GAGE4Q13068 117 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 CUL4BQ13620 913 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 CEP85LQ5SZL2 805 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 SYCP2LQ5T4T6 812 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 PMS2CLQ68D20 193 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 NAPEPLDQ6IQ20 393 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 NAA16Q6N069 864 aaPredicted RBP4.45□□□□□ -1.7
RUFY3-215ENST00000515479 CCDC174Q6PII3 467 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 SHFQ7M4L6 423 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 LURAP1LQ8IV03 231 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 HSPH1Q92598 858 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 WBP2Q969T9 261 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 TRIM44Q96DX7 344 aaPredicted RBP4.45□□□□□ -1.7
RUFY3-215ENST00000515479 PRMT6Q96LA8 375 aaPredicted RBP4.45□□□□□ -1.7
RUFY3-215ENST00000515479 MXD3Q9BW11 206 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 TTC12Q9H892 705 aaPredicted RBP4.45□□□□□ -1.7
RUFY3-215ENST00000515479 CD209Q9NNX6 404 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 SAYSD1Q9NPB0 183 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 SMARCAL1Q9NZC9 954 aa4.45□□□□□ -1.7
RUFY3-215ENST00000515479 NOL7Q9UMY1 257 aaKnown RBP4.45□□□□□ -1.7
RUFY3-215ENST00000515479 PTPRFP10586 1907 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 TCP10L2B9ZVM9 353 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 E7EWF7 191 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ATP2C2O75185 946 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 LETM1O95202 739 aaPredicted RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ADD2P35612 726 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 HTR3AP46098 478 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 AARSP49588 968 aaKnown RBP eCLIP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 HMGN5P82970 282 aaKnown RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 RBBP5Q15291 538 aaKnown RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 CCDC57Q2TAC2 916 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 FKBP1CQ5VVH2 108 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 JMJD6Q6NYC1 403 aaPredicted RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 POF1BQ8WVV4 589 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 PPM1EQ8WY54 764 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ANP32BQ92688 251 aaKnown RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ZKSCAN4Q969J2 545 aaPredicted RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 OTULINQ96BN8 352 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 CSF3RQ99062 836 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 TMEM39BQ9GZU3 492 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 MMP28Q9H239 520 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 CLSTN2Q9H4D0 955 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 NOX4Q9NPH5 578 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 DDX19AQ9NUU7 478 aaKnown RBP4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ZNF224Q9NZL3 707 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 CD207Q9UJ71 328 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 PFASO15067 1338 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 MYH11P35749 1972 aa4.44□□□□□ -1.7
RUFY3-215ENST00000515479 ANKRD18BA2A2Z9 1011 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TYW5A2RUC4 315 aaKnown RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 STX16-NPEPL1H3BU86 382 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 DYNC1I1O14576 645 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 STX16O14662 325 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 GPAA1O43292 621 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CLDN14O95500 239 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CRYAAP02489 173 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 KCNA5P22460 613 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PIGAP37287 484 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TIMM10P62072 90 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PHEXP78562 749 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 SLC20A2Q08357 652 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 SHHQ15465 462 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 LRRC26Q2I0M4 334 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CCDC158Q5M9N0 1113 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CBWD5Q5RIA9 395 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 FAM83BQ5T0W9 1011 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CES5AQ6NT32 575 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 ADAM5Q6NVV9 412 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 FAM173BQ6P4H8 233 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 FOXL2NBQ6ZUU3 175 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TRMT1LQ7Z2T5 733 aaKnown RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 ZC3HC1Q86WB0 502 aaKnown RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TBC1D10CQ8IV04 446 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 ZNF441Q8N8Z8 693 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 IL17RCQ8NAC3 791 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 GDPD5Q8WTR4 605 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TMEM170AQ8WVE7 144 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 THAP4Q8WY91 577 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TEKT1Q969V4 418 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 ZNF274Q96GC6 653 aaPredicted RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 NEUROD6Q96NK8 337 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TTYH1Q9H313 450 aaPredicted RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 ZSCAN16Q9H4T2 348 aaPredicted RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 TDRD3Q9H7E2 651 aaKnown RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 EBF2Q9HAK2 575 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PLCB1Q9NQ66 1216 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PIH1D3Q9NQM4 214 aaKnown RBP4.43□□□□□ -1.7
RUFY3-215ENST00000515479 CYSLTR2Q9NS75 346 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 SLC9A2Q9UBY0 812 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 NDRG3Q9UGV2 375 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 SLCO3A1Q9UIG8 710 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 SIX4Q9UIU6 781 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PARP14Q460N5 1801 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 PLXNA1Q9UIW2 1896 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 MROH7-TTC4A0A0A0MT08 1334 aa4.43□□□□□ -1.7
RUFY3-215ENST00000515479 MROH5Q6ZUA9 1318 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms