RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HSP90AA5PQ58FG0 334 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 REP15Q6BDI9 236 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF773Q6PK81 442 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PDZD4Q76G19 769 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TDRD5Q8NAT2 981 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 HASPINQ8TF76 798 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TMA16Q96EY4 203 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CSPG4P5Q96PW8 444 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SLC2A13Q96QE2 648 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF347Q96SE7 839 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NAT9Q9BTE0 207 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MED10Q9BTT4 135 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM165Q9HC07 324 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 TCF7L2Q9NQB0 619 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PFDN4Q9NQP4 134 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CNGB3Q9NQW8 809 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 RHBDL2Q9NX52 303 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 ENPP5Q9UJA9 477 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SCML2Q9UQR0 700 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SLCO1B7G3V0H7 640 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 KLK8O60259 260 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 DLX3O60479 287 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SCGB1D2O95969 90 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NTRK1P04629 796 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 HNRNPCP07910 306 aaKnown RBP eCLIP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PABPC1P11940 636 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PSMC3P17980 439 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 IL1RNP18510 177 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 FSHRP23945 695 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PBX3P40426 434 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GBE1Q04446 702 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CNGA3Q16281 694 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 WDR45BQ5MNZ6 344 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CCNJQ5T5M9 372 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SYCE2Q6PIF2 218 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CNSTQ6PJW8 725 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 LIX1LQ8IVB5 337 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PARP8Q8N3A8 854 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 DYNC2LI1Q8TCX1 351 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MRPS31Q92665 395 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 OTUB2Q96DC9 234 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 UCN2Q96RP3 112 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 CDRT15Q96T59 188 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 HAUS8Q9BT25 410 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SLIRPQ9GZT3 109 aaKnown RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 GABARAPL1Q9H0R8 117 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 SYBUQ9NX95 663 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 MARCOQ9UEW3 520 aaPredicted RBP7.36□□□□□ -1.23
CLIP1-205ENST00000514271 NOX1Q9Y5S8 564 aa7.36□□□□□ -1.23
CLIP1-205ENST00000514271 PCM1Q15154 2024 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SLC38A8A6NNN8 435 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TTC34A8MYJ7 566 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ECI2O75521 394 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TFPTP0C1Z6 253 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 KRT5P13647 590 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ITIH1P19827 911 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 GP5P40197 560 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 HCAR3P49019 387 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 NUBP1P53384 320 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SLC5A3P53794 718 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 NME5P56597 212 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 NAA20P61599 178 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF33AQ06730 810 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 MERTKQ12866 999 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 XKR7Q5GH72 579 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 FSCBQ5H9T9 825 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 RAB41Q5JT25 222 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PPP1R26Q5T8A7 1209 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LRRC49Q8IUZ0 686 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 UBALD2Q8IYN6 164 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TSPEARQ8WU66 669 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 PHF10Q8WUB8 498 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ANKRD49Q8WVL7 239 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ZNF707Q96C28 371 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CERS2Q96G23 380 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CNBD2Q96M20 576 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CCDC115Q96NT0 180 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ASB2Q96Q27 587 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SDHCQ99643 169 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 B3GNT5Q9BYG0 378 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TPK1Q9H3S4 243 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TLR8Q9NR97 1041 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 TRPM5Q9NZQ8 1165 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 GMPR2Q9P2T1 348 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 USP22Q9UPT9 525 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 AP4S1Q9Y587 144 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 OAS3Q9Y6K5 1087 aaKnown RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CCDC195A0A1B0GUA6 201 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 LOC730098B7Z3J9 87 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 SLC9A3R1O14745 358 aaPredicted RBP7.35□□□□□ -1.23
CLIP1-205ENST00000514271 MCF2LO15068 1137 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 CSPG5O95196 566 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 HPRP00739 348 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 IGLV3-25P01717 112 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 ALPLP05186 524 aa7.35□□□□□ -1.23
CLIP1-205ENST00000514271 EPCAMP16422 314 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms