RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 LDB1Q86U70 411 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 IQCHQ86VS3 1027 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 CCAR2Q8N163 923 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ZBTB8BQ8NAP8 495 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 MSANTD4Q8NCY6 345 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 CFAP61Q8NHU2 1237 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 MRPS27Q92552 414 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 SECISBP2LQ93073 1101 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ERO1AQ96HE7 468 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ZNF830Q96NB3 372 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 GFM1Q96RP9 751 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 NTPCRQ9BSD7 190 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 THUMPD3Q9BV44 507 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 VPS33BQ9H267 617 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 MAP6D1Q9H9H5 199 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 ACSS1Q9NUB1 689 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 OLAHQ9NV23 265 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 HAO2Q9NYQ3 351 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 OR14J1Q9UGF5 321 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TSPYL4Q9UJ04 414 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 HACL1Q9UJ83 578 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 DBNLQ9UJU6 430 aaKnown RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 TMEM184BQ9Y519 407 aaPredicted RBP3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 KIF27Q86VH2 1401 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 RPGRIP1LQ68CZ1 1315 aa3.41□□□□□ -1.86
CALCOCO2-223ENST00000514267 A0A087WV48 116 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TMEM272A0A1B0GTI8 110 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 H3BQ06 376 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 M0QZ24 198 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ATG13O75143 517 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 RSL1D1O76021 490 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TGDSO95455 350 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TRUB2O95900 331 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 LINGO3P0C6S8 592 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 CASTP20810 708 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 GNLYP22749 145 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 HOXC13P31276 330 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 MC5RP33032 325 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 CCR10P46092 362 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TMPRSS3P57727 454 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SPOCK1Q08629 439 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TRAF2Q12933 501 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 RALGDSQ12967 914 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZNF273Q14593 569 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 PTPRCAPQ14761 206 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 MVPQ14764 893 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 DLG2Q15700 870 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 Q5PR19 223 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 FRG2Q64ET8 278 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TMEM198Q66K66 360 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 PARM1Q6UWI2 310 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 MSANTD1Q6ZTZ1 278 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 INTS8Q75QN2 995 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ADCK2Q7Z695 626 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SDCCAG8Q86SQ7 713 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ADIPOR2Q86V24 386 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 GPSM1Q86YR5 675 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 CEP57L1Q8IYX8 460 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 FBXL14Q8N1E6 418 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TMEM199Q8N511 208 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ZNF713Q8N859 430 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 CAMKVQ8NCB2 501 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 OR1J2Q8NGS2 313 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SPATA3Q8NHX4 192 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TEKT4Q8WW24 435 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ATL1Q8WXF7 558 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SPACA9Q96E40 222 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 LRRC3BQ96PB8 259 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 NEK1Q96PY6 1258 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SMC6Q96SB8 1091 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 GPATCH1Q9BRR8 931 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 DESI2Q9BSY9 194 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 DNAI2Q9GZS0 605 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 ST6GALNAC4Q9H4F1 302 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 PPP1R3EQ9H7J1 279 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 DNAJC18Q9H819 358 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 NOL11Q9H8H0 719 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 COPS7BQ9H9Q2 264 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 LARSQ9P2J5 1176 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 MTRRQ9UBK8 725 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 STK39Q9UEW8 545 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 COG5Q9UP83 839 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 SRPRBQ9Y5M8 271 aaKnown RBP3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 RAPGEF2Q9Y4G8 1499 aa3.4□□□□□ -1.87
CALCOCO2-223ENST00000514267 RPS10-NUDT3A0A1W2PQS6 291 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 EIF4E1BA6NMX2 242 aaKnown RBP3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 ANXA2P2A6NMY6 339 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 A6NNC1 897 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 ACOT8O14734 319 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 PRAMEF11O60813 436 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 TADA2AO75478 443 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 PFKFB1P16118 471 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 TNFRSF1BP20333 461 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 PCGF2P35227 344 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 RFX2P48378 723 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 ENTPD1P49961 510 aa3.39□□□□□ -1.87
CALCOCO2-223ENST00000514267 NPY4RP50391 375 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms