RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FAM131AQ6UXB0 335 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SLC22A16Q86VW1 577 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 DEPDC4Q8N2C3 294 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 TTC29Q8NA56 475 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 UXS1Q8NBZ7 420 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 OR6K2Q8NGY2 324 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 KCNS3Q9BQ31 491 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 LRRC3Q9BY71 257 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 XYLT2Q9H1B5 865 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 KAT8Q9H7Z6 458 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ABCB9Q9NP78 766 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 POLE4Q9NR33 117 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 WDR70Q9NW82 654 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ACTR3BQ9P1U1 418 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 KANSL3Q9P2N6 904 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SLC27A5Q9Y2P5 690 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CRYBG1Q9Y4K1 1723 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CCDC162PA2VCL2 907 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 KRT87PA6NCN2 255 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 EFCAB9A8MZ26 197 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 K7EPI3 171 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 PRKACGP22612 351 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 HPCAL1P37235 193 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 RAB15P59190 212 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 BCL2L1Q07817 233 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 INTS6LQ5JSJ4 861 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SLC2A7Q6PXP3 512 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 MOB2Q70IA6 237 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SLC34A3Q8N130 599 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 BTN2A2Q8WVV5 523 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 HMCESQ96FZ2 354 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SLC25A51Q9H1U9 297 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ENOPH1Q9UHY7 261 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 PCDHB7Q9Y5E2 793 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ARL5AQ9Y689 179 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 NWD2Q9ULI1 1742 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ZNF142P52746 1687 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SH3PXD2BA1X283 911 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 FBP2O00757 339 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SOCS2O14508 198 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SDHDO14521 159 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 OR56A5P0C7T3 313 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 MYCLP1P12525 358 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CD36P16671 472 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 GSTM5P46439 218 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 DDI2Q5TDH0 399 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 PTCHD4Q6ZW05 846 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CPNE9Q8IYJ1 553 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SIDT2Q8NBJ9 832 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 WDR36Q8NI36 951 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 MUS81Q96NY9 551 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 ADAM2Q99965 735 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 HAPLN2Q9GZV7 340 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 MKS1Q9NXB0 559 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 STYXL1Q9Y6J8 313 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 KPNA1P52294 538 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 UFM1P61960 85 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 IL18R1Q13478 541 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 CTC1Q2NKJ3 1217 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 PIGGQ5H8A4 983 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 TMEM126BQ8IUX1 230 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 RBM12BQ8IXT5 1001 aaKnown RBP7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SCAIQ8N9R8 606 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 TMEM159Q96B96 161 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 B3GALT6Q96L58 329 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 SNX27Q96L92 541 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 DNAJB9Q9UBS3 223 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 TIAM2Q8IVF5 1701 aa7.69□□□□□ -1.18
CLCN3-209ENST00000513761 RGPD5Q99666 1765 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 SAGE2PA6NJ88 616 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 CXCL11O14625 94 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 DDNO94850 711 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-209ENST00000513761 HLA-DQB2P05538 268 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 RXRGP48443 463 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 NOVP48745 357 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 CDKL1Q00532 357 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 NPTX1Q15818 432 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 NIPAL1Q6NVV3 410 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 R3HCC1LQ7Z5L2 792 aaKnown RBP7.68□□□□□ -1.18
CLCN3-209ENST00000513761 DENND1CQ8IV53 801 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 LIX1Q8N485 282 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 SPPL2BQ8TCT7 592 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 STYXQ8WUJ0 223 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 PSMG2Q969U7 264 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 NSMCE3Q96MG7 304 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 C20orf27Q9GZN8 174 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 SMURF2Q9HAU4 748 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 TBCCD1Q9NVR7 557 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 ABT1Q9ULW3 272 aaKnown RBP7.68□□□□□ -1.18
CLCN3-209ENST00000513761 PLOD3O60568 738 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 MYBPC1Q00872 1141 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 MXD1Q05195 221 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 GPR153Q6NV75 609 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 MZT2BQ6NZ67 158 aa7.68□□□□□ -1.18
CLCN3-209ENST00000513761 RAB43Q86YS6 212 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms