RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF7P17097 686 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 TPH1P17752 444 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 CXCR5P32302 372 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 GRIA1P42261 906 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 MAGEA6P43360 314 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 TNNT3P45378 269 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 CTSCP53634 463 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 CYP4F3Q08477 520 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 SNX1Q13596 522 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 ITGA9Q13797 1035 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 AGAP9Q5VTM2 703 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 TTC27Q6P3X3 843 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 FAM151BQ6UXP7 276 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 C4orf22Q6V702 233 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 ZNF574Q6ZN55 896 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 CHST15Q7LFX5 561 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 B3GNT8Q7Z7M8 397 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 LINC00523Q86TU6 105 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 LRRTM4Q86VH4 590 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 CCNJLQ8IV13 435 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 MDM1Q8TC05 714 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 ACTRT1Q8TDG2 376 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 SLC37A2Q8TED4 501 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 ZCCHC14Q8WYQ9 949 aaKnown RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 NXPE2Q96DL1 559 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 LIN37Q96GY3 246 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 CDKN2AIPNLQ96HQ2 116 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 SGSM3Q96HU1 749 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 RANBP9Q96S59 729 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 UCK1Q9HA47 277 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 SARS2Q9NP81 518 aaKnown RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 ASCL3Q9NQ33 180 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 EIF2B3Q9NR50 452 aaKnown RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 KCND1Q9NSA2 647 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 NLE1Q9NVX2 485 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 SCHIP1Q9P0W5 487 aaPredicted RBP9.57□□□□□ -0.88
RNF4-221ENST00000513643 PAK5Q9P286 719 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 FKBPLQ9UIM3 349 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 SSUH2Q9Y2M2 353 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 PTPRQQ9UMZ3 2332 aa9.57□□□□□ -0.88
RNF4-221ENST00000513643 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 A0A087WV48 116 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 IGHV1OR21-1A0A087WYE8 117 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KIR2DS5A0A0G2JLQ3 304 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 A0A0G2JNG1 304 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 OR5K4A6NMS3 321 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KIR2DS3K7RE56 304 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 PRAMEF1O95521 474 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 IFNB1P01574 187 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SLC4A1P02730 911 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 RPLP0P05388 317 aaKnown RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 F3P13726 295 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 XRCC1P18887 633 aaPredicted RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 HADHAP40939 763 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KCNJ1P48048 391 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 OR1D5P58170 312 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 CDH17Q12864 832 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KIR2DS5Q14953 304 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 LONRF2Q1L5Z9 754 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 GPR33Q49SQ1 333 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 BCL7AQ4VC05 210 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 ZNF534Q76KX8 674 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SNX20Q7Z614 316 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 NXPE1Q8N323 547 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SLC35F6Q8N357 371 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 OR52K1Q8NGK4 314 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 OR13J1Q8NGT2 312 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SNIP1Q8TAD8 396 aaKnown RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 COG1Q8WTW3 980 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 STYXQ8WUJ0 223 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 PEX13Q92968 403 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 MS4A14Q96JA4 679 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 DNAJC1Q96KC8 554 aaKnown RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 SLC46A1Q96NT5 459 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 ASB8Q9H765 288 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SUDS3Q9H7L9 328 aaPredicted RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 POLR1BQ9H9Y6 1135 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 PRDM8Q9NQV8 689 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 RAB6BQ9NRW1 208 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KLC4Q9NSK0 619 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 ZNF624Q9P2J8 865 aaPredicted RBP9.56□□□□□ -0.88
RNF4-221ENST00000513643 KCNK6Q9Y257 313 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 FAM208BQ5VWN6 2430 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 KIF26BQ2KJY2 2108 aa9.56□□□□□ -0.88
RNF4-221ENST00000513643 SMG1Q96Q15 3661 aaKnown RBP9.55□□□□□ -0.88
RNF4-221ENST00000513643 ZFC3H1O60293 1989 aaKnown RBP9.55□□□□□ -0.88
RNF4-221ENST00000513643 KLHL33A6NCF5 533 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 USP27XA6NNY8 438 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 CDRT15L2A8MXV6 281 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 TMX2-CTNND1H3BSU7 103 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 FANCGO15287 622 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 TLX3O43711 291 aaPredicted RBP9.55□□□□□ -0.88
RNF4-221ENST00000513643 BRINP1O60477 761 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 POP7O75817 140 aaKnown RBP9.55□□□□□ -0.88
RNF4-221ENST00000513643 CPNE6O95741 557 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 HOXB3P14651 431 aaPredicted RBP9.55□□□□□ -0.88
RNF4-221ENST00000513643 ADRA1DP25100 572 aa9.55□□□□□ -0.88
RNF4-221ENST00000513643 SLC19A1P41440 591 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms