RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 KRTAP21-3Q3LHN1 58 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 CRB2Q5IJ48 1285 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 VWA5B1Q5TIE3 1220 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 MARC1Q5VT66 337 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 PSTKQ8IV42 348 aaKnown RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 CISD2Q8N5K1 135 aaKnown RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 TMEM102Q8N9M5 508 aaPredicted RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 MR1Q95460 341 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 ZNF514Q96K75 400 aaPredicted RBP10.75□□□□□ -0.69
DDX41-216ENST00000513562 LYSMD1Q96S90 227 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 FGF21Q9NSA1 209 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 C5AR2Q9P296 337 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 PCSK1NQ9UHG2 260 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 SNX7Q9UNH6 387 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 B3GNT3Q9Y2A9 372 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 ZFHX3Q15911 3703 aa10.75□□□□□ -0.69
DDX41-216ENST00000513562 TNRC6AQ8NDV7 1962 aaKnown RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 OR52A4PA6NMU1 304 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 PDZK1P1A8MUH7 402 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 EPHB6O15197 1021 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 SCRG1O75711 98 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 RAB40ALP0C0E4 278 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 PSMA2P25787 234 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 SPINT3P49223 89 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 KLK7P49862 253 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 EPHB1P54762 984 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 RRADP55042 308 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 CDH6P55285 790 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 CDK18Q07002 472 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 IHHQ14623 411 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 SEPT7Q16181 437 aaKnown RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 ABRAXAS1Q6UWZ7 409 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 MED25Q71SY5 747 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 ZC3H18Q86VM9 953 aaKnown RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 KMT5CQ86Y97 462 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 MCEMP1Q8IX19 187 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 ATPAF2Q8N5M1 289 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 TEX26Q8N6G2 289 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 ENDOVQ8N8Q3 282 aaKnown RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 LRFN5Q96NI6 719 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 TIMM29Q9BSF4 260 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
DDX41-216ENST00000513562 OR2AG1Q9H205 316 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 CHST8Q9H2A9 424 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 FAM83DQ9H4H8 585 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 ETNK2Q9NVF9 386 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 SLC23A2Q9UGH3 650 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 TCFL5Q9UL49 500 aa10.74□□□□□ -0.69
DDX41-216ENST00000513562 POLQO75417 2590 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 RGSL1A5PLK6 1076 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 CHUKO15111 745 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 PRPSAP2O60256 369 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 PRLP01236 227 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 MIPP30301 263 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 PER3P56645 1201 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TUBB4BP68371 445 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 MAMLD1Q13495 774 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 RAPSNQ13702 412 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TUBB2AQ13885 445 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 SYCP1Q15431 976 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 ZRSR2Q15696 482 aaKnown RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 INSCQ1MX18 579 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 PLA2G4EQ3MJ16 856 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 ZNF648Q5T619 568 aaPredicted RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 AGAP9Q5VTM2 703 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 CRTC3Q6UUV7 619 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TMCO3Q6UWJ1 677 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 IGFL3Q6UXB1 125 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 WASH2PQ6VEQ5 465 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 CERS6Q6ZMG9 384 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TMEM126BQ8IUX1 230 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 MCOLN2Q8IZK6 566 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 D2HGDHQ8N465 521 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 ZBTB2Q8N680 514 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 SLC38A9Q8NBW4 561 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 ST6GALNAC3Q8NDV1 305 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 UBE2Q2Q8WVN8 375 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 INPP5DQ92835 1189 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 TUBB2BQ9BVA1 445 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 NLNQ9BYT8 704 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 POLR1EQ9GZS1 481 aaKnown RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 TRIM39Q9HCM9 518 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 ARFGAP3Q9NP61 516 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 SEPT11Q9NVA2 429 aaKnown RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 CHKBQ9Y259 395 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 DNAJC16Q9Y2G8 782 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 NTNG1Q9Y2I2 539 aa10.73□□□□□ -0.69
DDX41-216ENST00000513562 COPG1Q9Y678 874 aaKnown RBP10.73□□□□□ -0.69
DDX41-216ENST00000513562 C1orf232A0A0U1RR37 186 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 H3BRJ5 948 aa10.72□□□□□ -0.69
DDX41-216ENST00000513562 MEN1O00255 615 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms