RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ACTR1BP42025 376 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 FASLGP48023 281 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 GFERP55789 205 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 ACTR1AP61163 376 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 SEMA5AQ13591 1074 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 INO80DQ53TQ3 878 aaPredicted RBP12.16□□□□□ -0.46
SDHA-215ENST00000512962 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.16□□□□□ -0.46
SDHA-215ENST00000512962 DOK6Q6PKX4 331 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 RFLNAQ6ZTI6 216 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 TRIM74Q86UV6 250 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 ZNF354CQ86Y25 554 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 ZDHHC17Q8IUH5 632 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 ESX1Q8N693 406 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 KCT2Q8NC54 265 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 JOSD2Q8TAC2 188 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 HCAR2Q8TDS4 363 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 TBC1D31Q96DN5 1066 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
SDHA-215ENST00000512962 MLXIPLQ9NP71 852 aa12.16□□□□□ -0.46
SDHA-215ENST00000512962 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
SDHA-215ENST00000512962 ZSCAN5CA6NGD5 496 aaPredicted RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 POLR1CO15160 346 aaPredicted RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 KATNA1O75449 491 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 SOD1P00441 154 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 LHCGRP22888 699 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 COPB1P53618 953 aaKnown RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 STX17P56962 302 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 RPS18P62269 152 aaKnown RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 CDK3Q00526 305 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 BIRC2Q13490 618 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 STIM1Q13586 685 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 MAP7Q14244 749 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 ACOX1Q15067 660 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 CNGA3Q16281 694 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 CCDC14Q49A88 953 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 ACBD5Q5T8D3 534 aaPredicted RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 PRAMEF13Q5VWM6 474 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 DPY19L2P1Q6NXN4 242 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 BRAT1Q6PJG6 821 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 ENOSF1Q7L5Y1 443 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 HSD11B1LQ7Z5J1 315 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 DNAAF5Q86Y56 855 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 APLFQ8IW19 511 aaPredicted RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
SDHA-215ENST00000512962 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 KLHL6Q8WZ60 621 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 C18orf8Q96DM3 657 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 NUS1Q96E22 293 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 ULBP3Q9BZM4 244 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 TWSG1Q9GZX9 223 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 B4GALT6Q9UBX8 382 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 APEX2Q9UBZ4 518 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 CTNND2Q9UQB3 1225 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 SLC17A4Q9Y2C5 497 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 TMEM98Q9Y2Y6 226 aa12.15□□□□□ -0.46
SDHA-215ENST00000512962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.15□□□□□ -0.46
SDHA-215ENST00000512962 HIVEP1P15822 2718 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 CFAP69A5D8W1 941 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 RGS13O14921 159 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 CREG1O75629 220 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 KIAA0754O94854 1291 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 PLEKP08567 350 aaPredicted RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 KRT9P35527 623 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 ETV3P41162 512 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 MAPK9P45984 424 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 PREPP48147 710 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 HDAC4P56524 1084 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 NFATC2Q13469 925 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 IL10RAQ13651 578 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 LAMB3Q13751 1172 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 WDR74Q6RFH5 385 aaPredicted RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 SFRP1Q8N474 314 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 CASKIN2Q8WXE0 1202 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 NCSTNQ92542 709 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 AHCYL2Q96HN2 611 aaKnown RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 ZNF641Q96N77 438 aaPredicted RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 SMIM14Q96QK8 99 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 RANBP9Q96S59 729 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 SLC38A3Q99624 504 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 ZPBPQ9BS86 351 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 TBC1D10AQ9BXI6 508 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 UNKQ9C0B0 810 aaKnown RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 TRIT1Q9H3H1 467 aaKnown RBP12.14□□□□□ -0.47
SDHA-215ENST00000512962 AKTIPQ9H8T0 292 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
SDHA-215ENST00000512962 DNHD1Q96M86 4753 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 TRAFD1O14545 582 aaPredicted RBP12.13□□□□□ -0.47
SDHA-215ENST00000512962 UBOX5O94941 541 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 IVLP07476 585 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 CCNFP41002 786 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
SDHA-215ENST00000512962 PGDP52209 483 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 DNASE1L3Q13609 305 aa12.13□□□□□ -0.47
SDHA-215ENST00000512962 RAPGEF1Q13905 1077 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms