RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 ASB2Q96Q27 587 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 SLC5A7Q9GZV3 580 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 JMJD4Q9H9V9 463 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 IFT80Q9P2H3 777 aaPredicted RBP8.87□□□□□ -0.99
VCAN-208ENST00000512590 TSC22D4Q9Y3Q8 395 aa8.87□□□□□ -0.99
VCAN-208ENST00000512590 RLN2P04090 185 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PAEPP09466 180 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CNTFP26441 200 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SLC26A5P58743 744 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ITPK1Q13572 414 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 STK11Q15831 433 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 GRTP1Q5TC63 336 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ZNF852Q6ZMS4 543 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 GPAT4Q86UL3 456 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PARP9Q8IXQ6 854 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 RBFAQ8N0V3 343 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PPP1R35Q8TAP8 253 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SPPL2BQ8TCT7 592 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 GPR151Q8TDV0 419 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 DNAJA4Q8WW22 397 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 AKAP1Q92667 903 aaKnown RBP eCLIP8.86□□□□□ -0.99
VCAN-208ENST00000512590 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PCBD2Q9H0N5 130 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 MEAF6Q9HAF1 191 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 KCNK13Q9HB14 408 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TLR9Q9NR96 1032 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 RIPK3Q9Y572 518 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SYNMO15061 1565 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SPATA31A5Q5VU36 1347 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SPATA31A7Q8IWB4 1347 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TFECO14948 347 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 IDH2P48735 452 aaKnown RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 RFTN2Q52LD8 501 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 KIAA0319LQ8IZA0 1049 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ITFG1Q8TB96 612 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 B3GALT6Q96L58 329 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PHF12Q96QT6 1004 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 DEFB126Q9BYW3 111 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TAF1DQ9H5J8 278 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 POMKQ9H5K3 350 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SP140LQ9H930 580 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 GNB5O14775 395 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 LRCH4O75427 683 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 PAHP00439 452 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ADH5P11766 374 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ZNF81P51508 661 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 OAZ1P54368 228 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 NAE1Q13564 534 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 EXOC3L2Q2M3D2 409 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SPANXN3Q5MJ09 141 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TPRG1Q6ZUI0 275 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SLC24A5Q71RS6 500 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TERB1Q8NA31 727 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 FBXO30Q8TB52 745 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 DPF2Q92785 391 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 OMA1Q96E52 524 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 BDH2Q9BUT1 245 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ASPNQ9BXN1 380 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ABCG8Q9H221 673 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CISHQ9NSE2 258 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 NOS1APO75052 506 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 PDHBP11177 359 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CD53P19397 219 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CYP2C18P33260 490 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 EIF1AXP47813 144 aaKnown RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 TMED10P49755 219 aaKnown RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 SEMG2Q02383 582 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 DPYSL2Q16555 572 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 UBQLNLQ8IYU4 475 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 NLGN4XQ8N0W4 816 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SEMA4DQ92854 862 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 LENG8Q96PV6 779 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 KXD1Q9BQD3 176 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ASB7Q9H672 318 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 AGO4Q9HCK5 861 aaKnown RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 ERVK-5Q9HDB9 667 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 FBXL12Q9NXK8 326 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CDC7O00311 574 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ANKRD28O15084 1053 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SHOXO15266 292 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ITGA5P08648 1049 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 SLC6A2P23975 617 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CCT3P49368 545 aaKnown RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 PTPN5P54829 565 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 FOXO4P98177 505 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 MGAT5Q09328 741 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TRAF3Q13114 568 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 TATDN1Q6P1N9 297 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 KCNT2Q6UVM3 1135 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 CCNI2Q6ZMN8 369 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 SPRYD4Q8WW59 207 aaPredicted RBP8.86□□□□□ -0.99
VCAN-208ENST00000512590 FOXJ1Q92949 421 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 HINT2Q9BX68 163 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 RNF19AQ9NV58 838 aa8.86□□□□□ -0.99
VCAN-208ENST00000512590 ZNF639Q9UID6 485 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms