RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM185AQ8NFB2 350 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PTPMT1Q8WUK0 201 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PIGBQ92521 554 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM46BQ96A09 425 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRR11Q96HE9 360 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 LRR1Q96L50 414 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 FCRL2Q96LA5 508 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 NSMCE2Q96MF7 247 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CDRT15Q96T59 188 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MNTQ99583 582 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 C9orf16Q9BUW7 83 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 IFIH1Q9BYX4 1025 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 FZD8Q9H461 694 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 RIOX1Q9H6W3 641 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MMP25Q9NPA2 562 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MARCH2Q9P0N8 246 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADGRL3Q9HAR2 1447 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 TTC21AQ8NDW8 1320 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SLC15A5A6NIM6 579 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 KCNAB3O43448 404 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 NRP2O60462 931 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PRAMEF2O60811 474 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 AVILO75366 819 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 IPO13O94829 963 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ECDO95905 644 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 GSTM1P09488 218 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 TPH1P17752 444 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SDHAP31040 664 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MMP13P45452 471 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ALDH1A3P47895 512 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SUCLG1P53597 346 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 HSPA2P54652 639 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 F2RL1P55085 397 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 GSCP56915 257 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPC5P78333 572 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 EFNB1P98172 346 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SGCAQ16586 387 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ALKBH6Q3KRA9 238 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 BEX5Q5H9J7 111 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PHYHD1Q5SRE7 291 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CWF19L1Q69YN2 538 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CAMK1DQ8IU85 385 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYP4X1Q8N118 509 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 SMARCC2Q8TAQ2 1214 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 LARP4BQ92615 738 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 MYOCQ99972 504 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 BCO1Q9HAY6 547 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 GPN1Q9HCN4 374 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ALKBH4Q9NXW9 302 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 OGFRQ9NZT2 677 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CRIM1Q9NZV1 1036 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 CNOT8Q9UFF9 292 aaKnown RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PACSIN2Q9UNF0 486 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 PLA2G4CQ9UP65 541 aa6.24□□□□□ -1.41
TRAPPC11-209ENST00000512476 ADCY9O60503 1353 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 A0A0A6YYK5 440 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 A0A1B0GVM2 712 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 GOLGA8IPA6NC78 632 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 GABRR3A8MPY1 467 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 FOXE1O00358 373 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 ABLIM1O14639 778 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 C1SP09871 688 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 EBLN1P0CF75 366 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 CYP4B1P13584 511 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 ETV5P41161 510 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 RAB28P51157 221 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 PNLIPRP2P54317 469 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 OXCT1P55809 520 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 RNF4P78317 190 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 CCDC14Q49A88 953 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 ARMC12Q5T9G4 340 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 ZNF595Q8IYB9 648 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 KATNAL2Q8IYT4 538 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 LKAAEAR1Q8TD35 194 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 CLEC4CQ8WTT0 213 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 HEXDCQ8WVB3 486 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 DNASE1L2Q92874 299 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 RASD2Q96D21 266 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 TMEM176AQ96HP8 235 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAGED4Q96JG8 741 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 TSG101Q99816 390 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 SOX7Q9BT81 388 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 MAGT1Q9H0U3 335 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 THAP2Q9H0W7 228 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 CCDC134Q9H6E4 229 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 UCK1Q9HA47 277 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 GLOD4Q9HC38 313 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 FAM118AQ9NWS6 357 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 GDE1Q9NZC3 331 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 MPP6Q9NZW5 540 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 UXTQ9UBK9 157 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 PEMTQ9UBM1 199 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 HBS1LQ9Y450 684 aaKnown RBP6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 SHPRHQ149N8 1683 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 RGPD8O14715 1765 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 GAGE10A6NGK3 116 aa6.23□□□□□ -1.41
TRAPPC11-209ENST00000512476 OR5K4A6NMS3 321 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms