RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 FAM198BQ6UWH4 519 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ADAMTSL4Q6UY14 1074 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 CHST15Q7LFX5 561 aaPredicted RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 TECPR1Q7Z6L1 1165 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 TSPAN33Q86UF1 283 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 PYROXD2Q8N2H3 581 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ZADH2Q8N4Q0 377 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 CCDC185Q8N715 623 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 RTL3Q8N8U3 475 aaKnown RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 ANKRD20A12PQ8NF67 263 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SHC3Q92529 594 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SCAMP4Q969E2 229 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 HDAC11Q96DB2 347 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 TRIM44Q96DX7 344 aaPredicted RBP8.97□□□□□ -0.97
NUP54-211ENST00000512151 SGSM3Q96HU1 749 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 COX14Q96I36 57 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 FCRL4Q96PJ5 515 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ERGIC2Q96RQ1 377 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 HERPUD2Q9BSE4 406 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ABCG8Q9H221 673 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 RETREG1Q9H6L5 497 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SYNCQ9H7C4 482 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 UCK1Q9HA47 277 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 MCCC2Q9HCC0 563 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 WASH6PQ9NQA3 447 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 SEMA5BQ9P283 1151 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 ZNHIT2Q9UHR6 403 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 TMEM59LQ9UK28 342 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 PCDHGB6Q9Y5F9 930 aa8.97□□□□□ -0.97
NUP54-211ENST00000512151 FN1P02751 2386 aaKnown RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 DOCK10Q96BY6 2186 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 STAB1Q9NY15 2570 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 KIR2DS5A0A0G2JLQ3 304 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 A0A0G2JNG1 304 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 GTPBP10A4D1E9 387 aaKnown RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 GOLGA8SH3BPF8 625 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 CPNE3O75131 537 aaKnown RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 VIPR1P32241 457 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 USP8P40818 1118 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 SLC19A1P41440 591 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 GPR1P46091 355 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 CAPZBP47756 277 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 CSNK1DP48730 415 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 PDE1BQ01064 536 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 BCL2L1Q07817 233 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 Q0VFX4 171 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 KIR2DS5Q14953 304 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 EXOC3L4Q17RC7 722 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 C15orf59Q2T9L4 293 aaPredicted RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 IRGCQ6NXR0 463 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 TRIM65Q6PJ69 517 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 GBP6Q6ZN66 633 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 ZNF765Q7L2R6 523 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 MRGPREQ86SM8 312 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 TMEM151BQ8IW70 566 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 GALNT16Q8N428 558 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 EMC1Q8N766 993 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 SIDT2Q8NBJ9 832 aaKnown RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 SMIM14Q96QK8 99 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 WDR77Q9BQA1 342 aaPredicted RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 NLNQ9BYT8 704 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 GANQ9H2C0 597 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 SEMA3GQ9NS98 782 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 ZNF624Q9P2J8 865 aaPredicted RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 NCOA6Q14686 2063 aaPredicted RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 CCDC88CQ9P219 2028 aa8.96□□□□□ -0.98
NUP54-211ENST00000512151 MAP1AP78559 2803 aaPredicted RBP8.96□□□□□ -0.98
NUP54-211ENST00000512151 NBEAL1Q6ZS30 2694 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 A0A1W2PQJ5 194 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 CCDC78A2IDD5 438 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 NPIPB15A6NHN6 443 aaPredicted RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 WASH4PA8MWX3 477 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 PRAMEF11O60813 436 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 JRKO75564 520 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 SCRG1O75711 98 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 ATP1A1P05023 1023 aaKnown RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 ALPPP05187 535 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 TPM2P07951 284 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 OTX2P32243 289 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 TSFMP43897 325 aaKnown RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 GABRB2P47870 512 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 ZNF75DP51815 510 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 LSM11P83369 360 aaKnown RBP eCLIP8.95□□□□□ -0.98
NUP54-211ENST00000512151 ADORA2A-AS1P86434 159 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 OTUD4Q01804 1114 aaKnown RBP8.95□□□□□ -0.98
NUP54-211ENST00000512151 DPTQ07507 201 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 GPR19Q15760 415 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 CDO1Q16878 200 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 FILIP1LQ4L180 1135 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 FKBP15Q5T1M5 1219 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 KLHDC7AQ5VTJ3 777 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 PLEKHA7Q6IQ23 1121 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 PRIMA1Q86XR5 153 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 TGIF2LYQ8IUE0 185 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 ZDHHC17Q8IUH5 632 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 DSELQ8IZU8 1212 aa8.95□□□□□ -0.98
NUP54-211ENST00000512151 ZNF514Q96K75 400 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms