RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DPM1O60762 260 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 LRCH4O75427 683 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 EBLN1P0CF75 366 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 LPOP22079 712 aaPredicted RBP18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 ITGA1P56199 1179 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 GPS2Q13227 327 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 KRT31Q15323 416 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 PLEKHN1Q494U1 663 aaPredicted RBP18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 ZNF517Q6ZMY9 492 aaPredicted RBP18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 POLNQ7Z5Q5 900 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 ATPAF2Q8N5M1 289 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 AVL9Q8NBF6 648 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 SYT11Q9BT88 431 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 EPHA6Q9UF33 1036 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 RARRES3Q9UL19 164 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 DNAJC16Q9Y2G8 782 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 CCDC168Q8NDH2 2452 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 DCHS2Q6V1P9 2916 aa18.68■□□□□ 0.58
HMGCS1-206ENST00000511774 ZNF185O15231 689 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 PRPSAP2O60256 369 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 IL4RP24394 825 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 EEF1GP26641 437 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 RPL10P27635 214 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 GRNP28799 593 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 HNRNPH3P31942 346 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 EPHB1P54762 984 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 RAPSNQ13702 412 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 TMCO3Q6UWJ1 677 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 ADGRG6Q86SQ4 1221 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 ZNF547Q8IVP9 402 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 TRIM48Q8IWZ4 208 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 CISD2Q8N5K1 135 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 C5orf34Q96MH7 638 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 CSPG4P5Q96PW8 444 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 LYSMD1Q96S90 227 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 FAM83DQ9H4H8 585 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 PDE7BQ9NP56 450 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 PCDHGB7Q9Y5F8 929 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 SVILO95425 2214 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 CCDC88CQ9P219 2028 aa18.67■□□□□ 0.58
HMGCS1-206ENST00000511774 TMCO5BA8MYB1 307 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 CHUKO15111 745 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 DRG2P55039 364 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 RPS15P62841 145 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 NIPAL4Q0D2K0 466 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 DPYSL2Q16555 572 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 KHDC1Q4VXA5 237 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 TDRD12Q587J7 1177 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 PRAMEF17Q5VTA0 474 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 TXNRD3NBQ6F5E7 133 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 ALG1LQ6GMV1 187 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 ZGRF1Q86YA3 2104 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 PSTKQ8IV42 348 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 BBS5Q8N3I7 341 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 SIDT2Q8NBJ9 832 aaKnown RBP18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 LPCAT1Q8NF37 534 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 ARRDC2Q8TBH0 407 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 SEC14L1Q92503 715 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 ZDHHC12Q96GR4 267 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 CHST8Q9H2A9 424 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 NTNG1Q9Y2I2 539 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 WDR37Q9Y2I8 494 aa18.66■□□□□ 0.58
HMGCS1-206ENST00000511774 FER1L5A0AVI2 2057 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 C1orf232A0A0U1RR37 186 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 PDZK1P1A8MUH7 402 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 H3BRJ5 948 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 MTX2O75431 263 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 TMEM63AO94886 807 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 ZNF7P17097 686 aaPredicted RBP18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 CDH6P55285 790 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 ITKQ08881 620 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 SYCP1Q15431 976 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 ZRANB3Q5FWF4 1079 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 CRB2Q5IJ48 1285 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 FAM182AQ5T1J6 154 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 RHOT1Q8IXI2 618 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 NDUFAF2Q8N183 169 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 GPR150Q8NGU9 434 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 LRRN4Q8WUT4 740 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 INPP5DQ92835 1189 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 MR1Q95460 341 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 FCRL4Q96PJ5 515 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 SMAD5Q99717 465 aaKnown RBP18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 MAP3K3Q99759 626 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 RAB33BQ9H082 229 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 ZWILCHQ9H900 591 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 FGF21Q9NSA1 209 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 POT1Q9NUX5 634 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 PARVAQ9NVD7 372 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 TRIM10Q9UDY6 481 aa18.65■□□□□ 0.58
HMGCS1-206ENST00000511774 CAPN1P07384 714 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 ZNF135P52742 658 aaPredicted RBP18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 QPCTQ16769 361 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 INSCQ1MX18 579 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 CDKAL1Q5VV42 579 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 IZUMO3Q5VZ72 239 aa18.64■□□□□ 0.57
HMGCS1-206ENST00000511774 RAVER1Q8IY67 606 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms