RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 LRMDAQ9H2I8 198 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PSD3Q9NYI0 1048 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 DNAJB4Q9UDY4 337 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 HACL1Q9UJ83 578 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 FAM169AQ9Y6X4 670 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PTPRCP08575 1304 aa3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 PDS5AQ29RF7 1337 aaKnown RBP3.35□□□□□ -1.87
TRAPPC11-207ENST00000511409 TRIP12Q14669 1992 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 hCG_1809904A0A1W2PP81 198 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 A0A1W2PPE2 198 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 A0A1W2PR64 198 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 A0A1W2PR77 199 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 LNP1A1A4G5 178 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SYNDIG1LA6NDD5 238 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 GLOD5A6NK44 160 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 TMEM189-UBE2V1I3L0A0 370 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 J3QR06 171 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ADAMDEC1O15204 470 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 IPO8O15397 1037 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 PAPSS1O43252 624 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ADAM20O43506 726 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF217O75362 1048 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 DDNO94850 711 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 BCL10O95999 233 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 NR2F1P10589 423 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 VPREB1P12018 145 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 MYOD1P15172 320 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 POLR2CP19387 275 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 NMBRP28336 390 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 TNFRSF8P28908 595 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 THBS3P49746 956 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 LIG4P49917 911 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ARSEP51690 589 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZXDBP98169 803 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 UBE2V1Q13404 147 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SNTA1Q13424 505 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 MVPQ14764 893 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 IZUMO4Q1ZYL8 232 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 C15orf59Q2T9L4 293 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 FAM98BQ52LJ0 330 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF585BQ52M93 769 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 KRTCAP3Q53RY4 240 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 GARNL3Q5VVW2 1013 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 NAA16Q6N069 864 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC30A6Q6NXT4 461 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 TPRG1Q6ZUI0 275 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 PRPF39Q86UA1 669 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 CEP97Q8IW35 865 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 PM20D2Q8IYS1 436 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SAMD14Q8IZD0 417 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SYT2Q8N9I0 419 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 THAP6Q8TBB0 222 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC20A1Q8WUM9 679 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 FIG4Q92562 907 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ABTB1Q969K4 478 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 PTERQ96BW5 349 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 CDCA5Q96FF9 252 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF385AQ96PM9 386 aaKnown RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 CDRT15Q96T59 188 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 IL25Q9H293 177 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC35C2Q9NQQ7 365 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 TAB2Q9NYJ8 693 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 WSB2Q9NYS7 404 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 NRBP1Q9UHY1 535 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 TSPYL4Q9UJ04 414 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF148Q9UQR1 794 aa3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF644Q9H582 1327 aaPredicted RBP3.34□□□□□ -1.87
TRAPPC11-207ENST00000511409 SAA2-SAA4A0A096LPE2 208 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 PLSCR5A0PG75 271 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMEM8BA6NDV4 472 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 SRRM3A6NNA2 597 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 H0YIN7 160 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 CAMTA2O94983 1202 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 DNTTP04053 509 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 ABCB1P08183 1280 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 DAOP14920 347 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 TRIM21P19474 475 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 NR2F2P24468 414 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 IL15P40933 162 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 ART1P52961 327 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 NANOS2P60321 138 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 PLIN5Q00G26 463 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 SLC20A2Q08357 652 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 SPOCK1Q08629 439 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 GRAPQ13588 217 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 SYT16Q17RD7 645 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 KRT79Q5XKE5 535 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 NADSYN1Q6IA69 706 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 LCN10Q6JVE6 187 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 TRNP1Q6NT89 227 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 INTS8Q75QN2 995 aaKnown RBP3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 HAUS6Q7Z4H7 955 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 TMPRSS12Q86WS5 348 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 GALNT13Q8IUC8 556 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 ZDHHC17Q8IUH5 632 aa3.33□□□□□ -1.88
TRAPPC11-207ENST00000511409 FBXO39Q8N4B4 442 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms