RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 GPAA1O43292 621 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 RANBP6O60518 1105 aaKnown RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A15PP0C7V4 464 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 FAM90A14PP0C7W9 464 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 ZNF806P0C7X5 589 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 TOP1P11387 765 aaKnown RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 PRPH2P23942 346 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 MARK3P27448 753 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 AMTP48728 403 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 IZUMO3Q5VZ72 239 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 ZSCAN25Q6NSZ9 544 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 ERC1Q8IUD2 1116 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 TMEM57Q8N5G2 664 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 OR14A16Q8NHC5 309 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 CEP76Q8TAP6 659 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 STAMQ92783 540 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 ZNF707Q96C28 371 aaPredicted RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 HNRNPABQ99729 332 aaKnown RBP6.67□□□□□ -1.34
USP53-206ENST00000510737 TMEM120AQ9BXJ8 343 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 ARRDC1-AS1Q9H2J1 176 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 TMEM248Q9NWD8 314 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 CLUHO75153 1309 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 CCDC171Q6TFL3 1326 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 KDM3AQ9Y4C1 1321 aa6.67□□□□□ -1.34
USP53-206ENST00000510737 NCAM2O15394 837 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 RPS6KA5O75582 802 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 RFPL2O75678 378 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 PRB1P04280 392 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 IFIT2P09913 472 aaKnown RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 HOXA13P31271 388 aaPredicted RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 HOXC13P31276 330 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 TCF7P36402 384 aaPredicted RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 NOVA1P51513 510 aaKnown RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 HILS1P60008 231 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 SP4Q02446 784 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 ILF3Q12906 894 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP53-206ENST00000510737 GIT2Q14161 759 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 NEDD9Q14511 834 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 CDC37Q16543 378 aaPredicted RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 BTBD16Q32M84 506 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 CLLU1OSQ5K130 101 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 MEX3BQ6ZN04 569 aaKnown RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 OR1N1Q8NGS0 311 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 FAM216AQ8WUB2 273 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 TRAPPC12Q8WVT3 735 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 KIAA1191Q96A73 305 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 SEC62Q99442 399 aaKnown RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 STK33Q9BYT3 514 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 FNIP2Q9P278 1114 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 CNTN6Q9UQ52 1028 aa6.66□□□□□ -1.34
USP53-206ENST00000510737 MRPL11Q9Y3B7 192 aaKnown RBP6.66□□□□□ -1.34
USP53-206ENST00000510737 A0A0A0MQY5 61 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 A0A0B4J293 547 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 M0QZ92 97 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 ATP9AO75110 1047 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 CCND2P30279 289 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 CYP2J2P51589 502 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NUDT6P53370 316 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 TROAPQ12815 778 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 KIF19Q2TAC6 998 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 QRICH1Q2TAL8 776 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 ZNF569Q5MCW4 686 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 OTUD3Q5T2D3 398 aaPredicted RBP6.65□□□□□ -1.34
USP53-206ENST00000510737 HEPHL1Q6MZM0 1159 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 CYP26C1Q6V0L0 522 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 FAM43BQ6ZT52 329 aaPredicted RBP6.65□□□□□ -1.34
USP53-206ENST00000510737 TPRG1Q6ZUI0 275 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 RNF144BQ7Z419 303 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NRSN1Q8IZ57 195 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 FAM9BQ8IZU0 186 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 LRRC43Q8N309 656 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NME8Q8N427 588 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 IGSF21Q96ID5 467 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NPAS1Q99742 590 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 TP63Q9H3D4 680 aaPredicted RBP6.65□□□□□ -1.34
USP53-206ENST00000510737 VAT1LQ9HCJ6 419 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 ERAP1Q9NZ08 941 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NFU1Q9UMS0 254 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 GINS2Q9Y248 185 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 NEUROG3Q9Y4Z2 214 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 CEP83Q9Y592 693 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 PCDHA10Q9Y5I2 948 aa6.65□□□□□ -1.34
USP53-206ENST00000510737 HECTD1Q9ULT8 2610 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 KALRNO60229 2985 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 RRN3P2A6NIE6 340 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 MBD3L5A6NJ08 208 aaPredicted RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 SAC3D1A6NKF1 404 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 EIF4E1BA6NMX2 242 aaKnown RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 RNF113AO15541 343 aaKnown RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 ASNA1O43681 348 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 HEXIM1O94992 359 aaKnown RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 GALTP07902 379 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 SNRNP70P08621 437 aaKnown RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 HOXB9P17482 250 aaPredicted RBP6.64□□□□□ -1.35
USP53-206ENST00000510737 TYK2P29597 1187 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 RCAN1P53805 252 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 LONRF1Q17RB8 773 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 LCE1FQ5T754 118 aa6.64□□□□□ -1.35
USP53-206ENST00000510737 FAM171A1Q5VUB5 890 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms