RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 SEMA4BQ9NPR2 832 aaPredicted RBP8.31□□□□□ -1.08
HTT-208ENST00000510626 NCKAP1Q9Y2A7 1128 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 B3GAT3O94766 335 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 LIMK2P53671 638 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 EFEMP1Q12805 493 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 LARS2Q15031 903 aaKnown RBP8.31□□□□□ -1.08
HTT-208ENST00000510626 TIGD6Q17RP2 521 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 KANK2Q63ZY3 851 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 OXR1Q8N573 874 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 HDAC2Q92769 488 aaKnown RBP8.31□□□□□ -1.08
HTT-208ENST00000510626 OSBPL7Q9BZF2 842 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 DLGAP1O14490 977 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 NUAK1O60285 661 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 SOX30O94993 753 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 SLC2A2P11168 524 aaPredicted RBP8.31□□□□□ -1.08
HTT-208ENST00000510626 CETPP11597 493 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 FMO4P31512 558 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 RAB5BP61020 215 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 PTGR1Q14914 329 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 LRTM1Q9HBL6 345 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 MARCH2Q9P0N8 246 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 MTRRQ9UBK8 725 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 SIX4Q9UIU6 781 aa8.31□□□□□ -1.08
HTT-208ENST00000510626 NR2F1P10589 423 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 AMPD1P23109 780 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 HTR2AP28223 471 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SERPINA4P29622 427 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 EIF2DP41214 584 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 PHACTR4Q8IZ21 702 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 TBC1D15Q8TC07 691 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ASB15Q8WXK1 588 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ATP13A3Q9H7F0 1226 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PTCH2Q9Y6C5 1203 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ABCB7O75027 752 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 LYPLA1O75608 230 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 MATKP42679 507 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MKRN4PQ13434 485 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 QPCTQ16769 361 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC25A25Q6KCM7 469 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 CHSY3Q70JA7 882 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PDSS2Q86YH6 399 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 TNFSF13BQ9Y275 285 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MRPS7Q9Y2R9 242 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 ATRXP46100 2492 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 NFASCO94856 1347 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLITRK3O94933 977 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 AP2A2O94973 939 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 RBL1P28749 1068 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 EPHA3P29320 983 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 APTXQ7Z2E3 356 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 MAPKAP1Q9BPZ7 522 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SYT15Q9BQS2 421 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 OR12D3Q9UGF7 316 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PHF24Q9UPV7 400 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC9A5Q14940 896 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 ZNF517Q6ZMY9 492 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.3□□□□□ -1.08
HTT-208ENST00000510626 ZNF639Q9UID6 485 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 F8VP50 259 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 NIPA2Q8N8Q9 360 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 FEM1CQ96JP0 617 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 ZFP57Q9NU63 452 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 AP2A1O95782 977 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 JAM2P57087 298 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 RNASEH2BQ5TBB1 312 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 ALG3Q92685 438 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GBA3Q9H227 469 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 TMEM165Q9HC07 324 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SENP2Q9HC62 589 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 BLOC1S4Q9NUP1 217 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 KCTD5Q9NXV2 234 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 TBC1D14Q9P2M4 693 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MBL2P11226 248 aaPredicted RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 IL32P24001 234 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SNAPC1Q16533 368 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GLYATQ6IB77 296 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SPARTQ8N0X7 666 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 CNDP2Q96KP4 475 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 AIF1LQ9BQI0 150 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 FARSBQ9NSD9 589 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 CDH10Q9Y6N8 788 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 XKRYO14609 159 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 EPORP19235 508 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GNA12Q03113 381 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GEMIN6Q8WXD5 167 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 NCSTNQ92542 709 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 FRMD6Q96NE9 622 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 NR2E3Q9Y5X4 410 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 URODP06132 367 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 RPS17P08708 135 aaKnown RBP8.3□□□□□ -1.08
HTT-208ENST00000510626 MTM1Q13496 603 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SLC27A1Q6PCB7 646 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 MRIQ9BWK5 157 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 RNF38Q9H0F5 515 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 SNCAIPQ9Y6H5 919 aa8.3□□□□□ -1.08
HTT-208ENST00000510626 GRXCR2A6NFK2 248 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms