RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 F3P13726 295 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 XRCC1P18887 633 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 ACRV1P26436 265 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 ACTR1BP42025 376 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 GRIA1P42261 906 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 ACTR1AP61163 376 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 INSM1Q01101 510 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 GPS1Q13098 491 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 DHX34Q14147 1143 aaKnown RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 GUSBP11Q6P575 273 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 IYDQ6PHW0 289 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 DOK6Q6PKX4 331 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 ZNF534Q76KX8 674 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 RBM12BQ8IXT5 1001 aaKnown RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 CHCHD4Q8N4Q1 142 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 BEND7Q8N7W2 519 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 KYQ8NBH2 561 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 CPT1BQ92523 772 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 COPS8Q99627 209 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 TMEM121BQ9BXQ6 578 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-221ENST00000510541 ZDHHC3Q9NYG2 299 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 GPSM3Q9Y4H4 160 aa17.02■□□□□ 0.32
CLDND1-221ENST00000510541 F8W8V4 182 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A9O60656 530 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 TPH1P17752 444 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A6P19224 532 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A1P22309 533 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A4P22310 534 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 AK4P27144 223 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 MC4RP32245 332 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 FOXN2P32314 431 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A3P35503 534 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A5P35504 534 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 PPARGP37231 505 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 PRLHRP49683 370 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 CAMK2BQ13554 666 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 AFTPHQ6ULP2 937 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 EFL1Q7Z2Z2 1120 aaKnown RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 PRUNE1Q86TP1 453 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 RASGEF1AQ8N9B8 481 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 NAT8LQ8N9F0 302 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 PPHLN1Q8NEY8 458 aaKnown RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 ZFPM2Q8WW38 1151 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 TTC1Q99614 292 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 NRSN2Q9GZP1 204 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 CAAP1Q9H8G2 361 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A7Q9HAW7 530 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A10Q9HAW8 530 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 UGT1A8Q9HAW9 530 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 PCYT1BQ9Y5K3 369 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-221ENST00000510541 ACACBO00763 2458 aa17.01■□□□□ 0.31
CLDND1-221ENST00000510541 MGAT4DA6NG13 374 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 KIF2AO00139 706 aaPredicted RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 BUD23O43709 281 aaKnown RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 HYAL3O43820 417 aaPredicted RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 ATP1B2P14415 290 aaPredicted RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 MSH3P20585 1137 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 IVDP26440 423 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 MLLT3P42568 568 aaPredicted RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 NSG1P42857 185 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 PTGIRP43119 386 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 EPHA4P54764 986 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 GPLD1P80108 840 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 FOXC1Q12948 553 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 TUBB2AQ13885 445 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 PTPRCAPQ14761 206 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 AARS2Q5JTZ9 985 aaKnown RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 METRNLQ641Q3 311 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 SLC30A9Q6PML9 568 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 DHRS13Q6UX07 377 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 CHST15Q7LFX5 561 aaPredicted RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 CAND1Q86VP6 1230 aaKnown RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 AMZ2Q86W34 360 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 PPIL6Q8IXY8 311 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 ARL14Q8N4G2 192 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 PNPLA1Q8N8W4 532 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 OR2L2Q8NH16 312 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 GDAP1Q8TB36 358 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 GATA6Q92908 595 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
CLDND1-221ENST00000510541 TUBB2BQ9BVA1 445 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 CRLS1Q9UJA2 301 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 ACSL5Q9ULC5 683 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 SOX13Q9UN79 622 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 CLCA2Q9UQC9 943 aa17■□□□□ 0.31
CLDND1-221ENST00000510541 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
CLDND1-221ENST00000510541 COL27A1Q8IZC6 1860 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-221ENST00000510541 FAM237BA0A1B0GVD1 139 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 SGTAO43765 313 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 IDSP22304 550 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 CASQ1P31415 396 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 B4GALNT1Q00973 533 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 PLOD1Q02809 727 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-221ENST00000510541 RPA4Q13156 261 aa16.99■□□□□ 0.31
CLDND1-221ENST00000510541 RTP5Q14D33 572 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms