RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 BMXP51813 675 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 COPB1P53618 953 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 OAZ1P54368 228 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 AIF1P55008 147 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 SCAND1P57086 179 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 NLRP11P59045 1033 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 IL2P60568 153 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 PSMC6P62333 389 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 SUMO1P63165 101 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 FAM189BP81408 668 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 PPP2R2BQ00005 443 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TBL3Q12788 808 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MAP3K12Q12852 859 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ELAVL1Q15717 326 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MAPK6Q16659 721 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MEP1BQ16820 701 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TXNRD1Q16881 649 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 NKAIN1Q4KMZ8 207 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 RRAGBQ5VZM2 374 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 FAM109BQ6ICB4 259 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ETFRF1Q6IPR1 90 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MFSD5Q6N075 450 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 NPNTQ6UXI9 565 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 RUFY4Q6ZNE9 571 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 RTL4Q6ZR62 310 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 FAM83HQ6ZRV2 1179 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TMPRSS9Q7Z410 1059 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 KCTD20Q7Z5Y7 419 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 CAMKMTQ7Z624 323 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 DDX53Q86TM3 631 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 BIVMQ86UB2 503 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 FAM131BQ86XD5 332 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 LINC00518Q8N0U6 118 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ADSSL1Q8N142 457 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 CLEC4FQ8N1N0 589 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MINDY2Q8NBR6 621 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 EXD1Q8NHP7 514 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 STT3BQ8TCJ2 826 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 SLC25A36Q96CQ1 311 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 C18orf8Q96DM3 657 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 IQCDQ96DY2 449 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TPD52L3Q96J77 140 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 PPP1R36Q96LQ0 422 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF558Q96NG5 402 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 VPS35Q96QK1 796 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ACBD6Q9BR61 282 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 CCDC28BQ9BUN5 200 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 APOL6Q9BWW8 343 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 BBS2Q9BXC9 721 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 YIPF3Q9GZM5 350 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 OR51V1Q9H2C8 321 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 LRMDAQ9H2I8 198 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 GOLPH3LQ9H4A5 285 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 RIBC2Q9H4K1 309 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 TDRD3Q9H7E2 651 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 VCX3AQ9NNX9 186 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MRPS30Q9NP92 439 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 DNAJC11Q9NVH1 559 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 HYPKQ9NX55 129 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 VSX1Q9NZR4 365 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 PSMC3IPQ9P2W1 217 aaPredicted RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MYO1AQ9UBC5 1043 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 VPS51Q9UID3 782 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 LNPEPQ9UIQ6 1025 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 GGA2Q9UJY4 613 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 STXBP5LQ9Y2K9 1186 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 MAD1L1Q9Y6D9 718 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 NUMBLQ9Y6R0 609 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 COL15A1P39059 1388 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ZFYVE16Q7Z3T8 1539 aa4.51□□□□□ -1.69
NIPBL-206ENST00000509429 ZC3H13Q5T200 1668 aaKnown RBP4.51□□□□□ -1.69
NIPBL-206ENST00000509429 SCAF11Q99590 1463 aaKnown RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 PTPRCP08575 1304 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 ZNF644Q9H582 1327 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 TRAV20A0A0B4J274 112 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 CENPVL1A0A0U1RR11 272 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 KANSL1LA0AUZ9 987 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 SYCE3A1L190 88 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 VWA3AA6NCI4 1184 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 KBTBD13C9JR72 458 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 PRSS44E7EML9 344 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 H0YJX3 145 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 MAP2K7O14733 419 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 SLC9A3R1O14745 358 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 BET1O15155 118 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 ZSCAN12O43309 604 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 H2AFYO75367 372 aaKnown RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 PDE5AO76074 875 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 NSA2O95478 260 aaKnown RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 TGM6O95932 706 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 LGI1O95970 557 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 SOD2P04179 222 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 TUBB4AP04350 444 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 IGFBP1P08833 259 aaPredicted RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 LINGO3P0C6S8 592 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 JUPP14923 745 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 CORO1AP31146 461 aaKnown RBP4.5□□□□□ -1.69
NIPBL-206ENST00000509429 CTNNB1P35222 781 aa4.5□□□□□ -1.69
NIPBL-206ENST00000509429 ARL3P36405 182 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms