RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 IDSP22304 550 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 RPL10P27635 214 aaKnown RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 SLC19A1P41440 591 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 CDKN2BP42772 138 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 MAGEA1P43355 309 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 UBE2IP63279 158 aaKnown RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 NFKB2Q00653 900 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 FOXM1Q08050 763 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 CLCA4Q14CN2 919 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 BORAQ6PGQ7 559 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 PID1Q7Z2X4 250 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 ZC3H18Q86VM9 953 aaKnown RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 BMPERQ8N8U9 685 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 P3H4Q92791 437 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 TGM7Q96PF1 710 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 EFHD1Q9BUP0 239 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 GPN2Q9H9Y4 310 aaPredicted RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 APMAPQ9HDC9 416 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 KLHL8Q9P2G9 620 aaPredicted RBP15.16■□□□□ 0.02
TPM3-219ENST00000509409 PILRAQ9UKJ1 303 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 ADGRG1Q9Y653 693 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 ALG6Q9Y672 507 aa15.16■□□□□ 0.02
TPM3-219ENST00000509409 LILRA5A6NI73 299 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 CAPN5O15484 640 aaPredicted RBP15.15■□□□□ 0.02
TPM3-219ENST00000509409 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 UBXN7O94888 489 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 ZRANB2O95218 330 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM3-219ENST00000509409 VCLP18206 1134 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 ITGB6P18564 788 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 NFKB1P19838 968 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 WNT3AP56704 352 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 TMEM115Q12893 351 aaPredicted RBP15.15■□□□□ 0.02
TPM3-219ENST00000509409 PRKD1Q15139 912 aaPredicted RBP15.15■□□□□ 0.02
TPM3-219ENST00000509409 ATP13A5Q4VNC0 1218 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 SPOCD1Q6ZMY3 1216 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 TRAPPC5Q8IUR0 188 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 BRSK1Q8TDC3 778 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 CXorf40BQ96DE9 158 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 TIMM29Q9BSF4 260 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 TRABDQ9H4I3 376 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 UCK1Q9HA47 277 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 STARD5Q9NSY2 213 aa15.15■□□□□ 0.02
TPM3-219ENST00000509409 NFKBIL1Q9UBC1 381 aaPredicted RBP15.15■□□□□ 0.02
TPM3-219ENST00000509409 LOC101059948A0A1B0GTJ6 334 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 MTSS1O43312 755 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 PSTPIP1O43586 416 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 RASSF9O75901 435 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 STK17BO94768 372 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 WISP1O95388 367 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 PECAM1P16284 738 aaPredicted RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 CD68P34810 354 aaPredicted RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 SEPHS1P49903 392 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 DRG2P55039 364 aaKnown RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 GFERP55789 205 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 WASHC5Q12768 1159 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 NOMO1Q15155 1222 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 TCEAL1Q15170 157 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 ATG14Q6ZNE5 492 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 RCOR2Q8IZ40 523 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 UNC5BQ8IZJ1 945 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 BLOC1S5Q8TDH9 187 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 C9orf72Q96LT7 481 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 TRIM4Q9C037 500 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 SLC25A18Q9H1K4 315 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 TRIT1Q9H3H1 467 aaKnown RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 CLMPQ9H6B4 373 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 GEMIN8Q9NWZ8 242 aaKnown RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 ZNF624Q9P2J8 865 aaPredicted RBP15.14■□□□□ 0.01
TPM3-219ENST00000509409 SLC30A1Q9Y6M5 507 aa15.14■□□□□ 0.01
TPM3-219ENST00000509409 LOC285095A0A1B0GVY8 99 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 OR52A4PA6NMU1 304 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 NKX2-8O15522 239 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A9O60656 530 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 PRKAR1AP10644 381 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A6P19224 532 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A1P22309 533 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 UGT1A4P22310 534 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 HMGCLP35914 325 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 SPAM1P38567 509 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 HALP42357 657 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 CCR10P46092 362 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 ABHD18Q0P651 414 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 CHRNA6Q15825 494 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 PPP2R5EQ16537 467 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 KHDC1Q4VXA5 237 aaKnown RBP15.13■□□□□ 0.01
TPM3-219ENST00000509409 TFDP3Q5H9I0 405 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 SIRPB2Q5JXA9 342 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 CCDC181Q5TID7 509 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 ZDHHC20Q5W0Z9 365 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 KDELC1Q6UW63 502 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 ABRAXAS1Q6UWZ7 409 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 TIPARPQ7Z3E1 657 aaKnown RBP15.13■□□□□ 0.01
TPM3-219ENST00000509409 GLT6D1Q7Z4J2 308 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 ZNF547Q8IVP9 402 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 IPMKQ8NFU5 416 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 RNF31Q96EP0 1072 aa15.13■□□□□ 0.01
TPM3-219ENST00000509409 SLC45A3Q96JT2 553 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms