RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CCDC3Q9BQI4 270 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 APOOQ9BUR5 198 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 MAGEB5Q9BZ81 275 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 SLC39A8Q9C0K1 460 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 STRADBQ9C0K7 418 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 PRORYQ9H606 182 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 WDR26Q9H7D7 661 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 MBNL1Q9NR56 388 aaKnown RBP7.44□□□□□ -1.22
CCSER1-208ENST00000509109 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.44□□□□□ -1.22
CCSER1-208ENST00000509109 GPATCH2LQ9NWQ4 482 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 ERVK13-1Q9NX77 482 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 PADI4Q9UM07 663 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 SATB2Q9UPW6 733 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 EFR3BQ9Y2G0 817 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 DGKBQ9Y6T7 804 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
CCSER1-208ENST00000509109 ZNF462Q96JM2 2506 aa7.44□□□□□ -1.22
CCSER1-208ENST00000509109 ASH1LQ9NR48 2969 aaKnown RBP7.44□□□□□ -1.22
CCSER1-208ENST00000509109 CCDC187A0A096LP49 1063 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 A0A1W2PQJ5 194 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GOLGA6L19H0YKK7 550 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 PSMD11O00231 422 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TEX33O43247 280 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GCATO75600 419 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 RECQL5O94762 991 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CPP00450 1065 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TNFP01375 233 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TPM3P06753 285 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ITGA2BP08514 1039 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 HOXC4P09017 264 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GSTM1P09488 218 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CYP2A6P11509 494 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 MYF5P13349 255 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CA4P22748 312 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ITPKBP27987 946 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 SCNN1BP51168 640 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 LINC00310P59036 64 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CXADRP78310 365 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 C1orf61Q13536 156 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CA9Q16790 459 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ENPP7Q6UWV6 458 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 USP45Q70EL2 814 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ZNF571Q7Z3V5 609 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 RD3Q7Z3Z2 195 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 LRRC49Q8IUZ0 686 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ARHGAP12Q8IWW6 846 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 NPWQ8N729 165 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 NIPA2Q8N8Q9 360 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 KYQ8NBH2 561 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 KIAA1524Q8TCG1 905 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 PDCD6IPQ8WUM4 868 aaKnown RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TEKT4Q8WW24 435 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 SYN2Q92777 582 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TMEM159Q96B96 161 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 NUS1Q96E22 293 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 PDXPQ96GD0 296 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ATXN7L3BQ96GX2 97 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GFM1Q96RP9 751 aaKnown RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CLPBQ9H078 707 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ISCUQ9H1K1 167 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TCEAL2Q9H3H9 227 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 ASCL3Q9NQ33 180 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 PHPT1Q9NRX4 125 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 CWC15Q9P013 229 aaKnown RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 SIRPGQ9P1W8 387 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 RCOR3Q9P2K3 495 aaPredicted RBP7.43□□□□□ -1.22
CCSER1-208ENST00000509109 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 TNFRSF10DQ9UBN6 386 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GULP1Q9UBP9 304 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 IP6K2Q9UHH9 426 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 LCMT1Q9UIC8 334 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 GPR34Q9UPC5 381 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 COQ6Q9Y2Z9 468 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 OR1A2Q9Y585 309 aa7.43□□□□□ -1.22
CCSER1-208ENST00000509109 D6RAR5 112 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 DDX3XO00571 662 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 KLK10O43240 276 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 NUAK1O60285 661 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 BUB1BO60566 1050 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 SERPING1P05155 500 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 GSNP06396 782 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 MYCLP1P12525 358 aaPredicted RBP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 PNLIPP16233 465 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 VAMP1P23763 118 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 VIPR1P32241 457 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 MMP13P45452 471 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 RGRP47804 291 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 SRSF3P84103 164 aaKnown RBP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 RHDQ02161 417 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 SLC10A7Q0GE19 358 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 ILF3Q12906 894 aaKnown RBP eCLIP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 RALGDSQ12967 914 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 BIRC2Q13490 618 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 ARHGEF7Q14155 803 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 KRT81Q14533 505 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 ACOX1Q15067 660 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 HADHQ16836 314 aaKnown RBP7.42□□□□□ -1.22
CCSER1-208ENST00000509109 SMTNL2Q2TAL5 461 aa7.42□□□□□ -1.22
CCSER1-208ENST00000509109 MARC1Q5VT66 337 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms