RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PGAP2Q9UHJ9 254 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 POLG2Q9UHN1 485 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 CLIC4Q9Y696 253 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 MAU2Q9Y6X3 613 aa4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 ZNF142P52746 1687 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-206ENST00000508524 CPS1P31327 1500 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 MYO3AQ8NEV4 1616 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 STRCP1A6NGW2 1772 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 CEP170BQ9Y4F5 1589 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 PMS2P5A8MQ11 134 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 SYNGR3O43761 229 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 AGR2O95994 175 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 ATP1A3P13637 1013 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 AHRP35869 848 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 PBX3P40426 434 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 ARCN1P48444 511 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 CASP6P55212 293 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 CSTF3Q12996 717 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 ATF7IPQ6VMQ6 1270 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 TMEM116Q8NCL8 245 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 IL17REQ8NFR9 667 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM76AQ8TAV0 307 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 FAM149B1Q96BN6 582 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 ARHGEF26Q96DR7 871 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 SCRN2Q96FV2 425 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 NEUROD6Q96NK8 337 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 F2RL3Q96RI0 385 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 JMJD4Q9H9V9 463 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 DDX43Q9NXZ2 648 aaKnown RBP4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 MARCH4Q9P2E8 410 aaPredicted RBP4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 NPATQ14207 1427 aa4.97□□□□□ -1.61
TOPBP1-206ENST00000508524 KDM5CP41229 1560 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 CFAP74Q9C0B2 1584 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 GOLGA3Q08378 1498 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 OR5K3A6NET4 321 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 C5orf60A6NFR6 353 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 JRKO75564 520 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 GM2AP17900 193 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 NR0B1P51843 470 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 ARHGAP17Q68EM7 881 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 AFAP1Q8N556 730 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 WDSUB1Q8N9V3 476 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 OR10V1Q8NGI7 309 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 SMARCE1Q969G3 411 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 PSMD1Q99460 953 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 RBM4Q9BWF3 364 aaKnown RBP4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 LRMDAQ9H2I8 198 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 RANGRFQ9HD47 186 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 C9orf78Q9NZ63 289 aaPredicted RBP4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 KLHL9Q9P2J3 617 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 COPG2Q9UBF2 871 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 STK39Q9UEW8 545 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 PTPRKQ15262 1439 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 CTTNBP2Q8WZ74 1663 aa4.96□□□□□ -1.62
TOPBP1-206ENST00000508524 REREQ9P2R6 1566 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 SETBP1Q9Y6X0 1596 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 RAPGEF6Q8TEU7 1601 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 ATP2A1O14983 1001 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 PRKNO60260 465 aaPredicted RBP4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 CTSVO60911 334 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 KCNK5O95279 499 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 MLYCDO95822 493 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 SOWAHCQ53LP3 525 aaPredicted RBP4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 NSUN5P2Q63ZY6 315 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 SLC35E4Q6ICL7 350 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 CYP20A1Q6UW02 462 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 CEACAM20Q6UY09 585 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 Q75L30 129 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 ADSSL1Q8N142 457 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 RBM15BQ8NDT2 890 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 OR1J2Q8NGS2 313 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 DNAAF4Q8WXU2 420 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 PHF21AQ96BD5 680 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF354BQ96LW1 612 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 C17orf77Q96MU5 243 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 PIGMQ9H3S5 423 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 TFB2MQ9H5Q4 396 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 MAGIXQ9H6Y5 334 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 POLR1BQ9H9Y6 1135 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 TCP11L1Q9NUJ3 509 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 GTF2A1LQ9UNN4 478 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 AGLP35573 1532 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 LRRC7Q96NW7 1537 aa4.95□□□□□ -1.62
TOPBP1-206ENST00000508524 CEP350Q5VT06 3117 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 TMEM178BH3BS89 294 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 WISP2O76076 250 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 IPO7O95373 1038 aaKnown RBP4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 TUBBP07437 444 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 INHBAP08476 426 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 PATE4P0C8F1 98 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF23P17027 643 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 BSGP35613 385 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 TUBB4BP68371 445 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 CDC16Q13042 620 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 PNLIPRP3Q17RR3 467 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 TMEM30BQ3MIR4 351 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 ZNF805Q5CZA5 627 aa4.94□□□□□ -1.62
TOPBP1-206ENST00000508524 WDR38Q5JTN6 314 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms