RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 UBR5O95071 2799 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 hCG_1818297A0A087WSY0 165 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 LOC285095A0A1B0GVY8 99 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 KMOO15229 486 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 GPR39O43194 453 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 VEGFDO43915 354 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ANKRD34CP0C6C1 535 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 LIFP15018 202 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 BRAFP15056 766 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ZNF7P17097 686 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 XRCC1P18887 633 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 CHRNA4P43681 627 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 GFERP55789 205 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 WNT3AP56704 352 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 MC2RQ01718 297 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 SEPT7Q16181 437 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 TBR1Q16650 682 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 SIRPB2Q5JXA9 342 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 CCDC70Q6NSX1 233 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 BZW1Q7L1Q6 419 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 C11orf96Q7Z7L8 435 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 LRRTM4Q86VH4 590 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ZC3H18Q86VM9 953 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 CACNA2D3Q8IZS8 1091 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 TTC30BQ8N4P2 665 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 HAUS1Q96CS2 278 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 MRGPRX2Q96LB1 330 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.363e-8■■■■□ 21.3
HMGCS1-205ENST00000508319 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 CTRCQ99895 268 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ARHGAP9Q9BRR9 750 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ANP32EQ9BTT0 268 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 APMAPQ9HDC9 416 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 BPIFA1Q9NP55 256 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 STARD5Q9NSY2 213 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 SIDT1Q9NXL6 827 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 ZNF624Q9P2J8 865 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 TFR2Q9UP52 801 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 DNAJC16Q9Y2G8 782 aa12.81□□□□□ -0.36
HMGCS1-205ENST00000508319 PDZK1P1A8MUH7 402 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 GAPDHSO14556 408 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 MTSS1O43312 755 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 RAD1O60671 282 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 CDK14O94921 469 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 LCA5LO95447 670 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 EPOP01588 193 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 C9P02748 559 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 ITGB6P18564 788 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 RPL10P27635 214 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC19A1P41440 591 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 MAGEA1P43355 309 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 TFDP3Q5H9I0 405 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 XKR5Q6UX68 686 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 CEACAM20Q6UY09 585 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 TMEM26Q6ZUK4 368 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 ZNF567Q8N184 647 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 KRT35Q92764 455 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 P3H4Q92791 437 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 TRABDQ9H4I3 376 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 IL26Q9NPH9 171 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 POT1Q9NUX5 634 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 KLHL8Q9P2G9 620 aaPredicted RBP12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 SPENQ96T58 3664 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-205ENST00000508319 OR52A4PA6NMU1 304 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC28A2O43868 658 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 UBXN7O94888 489 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 DLGAP3O95886 979 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 VIPP01282 170 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 TYRP1P17643 537 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 CA5AP35218 305 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 CAPZBP47756 277 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 CLCA4Q14CN2 919 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 PPP2R5EQ16537 467 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 AGAP9Q5VTM2 703 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 C11orf63Q6NUN7 778 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 FAM151BQ6UXP7 276 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 WASH2PQ6VEQ5 465 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 PLXDC1Q8IUK5 500 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 TRAPPC5Q8IUR0 188 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 TRIM48Q8IWZ4 208 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 NLGN4XQ8N0W4 816 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 SLC25A41Q8N5S1 370 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 IPMKQ8NFU5 416 aa12.79□□□□□ -0.36
HMGCS1-205ENST00000508319 NLGN4YQ8NFZ3 816 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms