RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PIK3CAP42336 1068 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 RAB6CQ53S08 254 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 PLXDC2Q6UX71 529 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 EMC1Q8N766 993 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 GRAPLQ8TC17 118 aaPredicted RBP4.72□□□□□ -1.65
DHFR-204ENST00000508282 ZNF354BQ96LW1 612 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 SEMA3CQ99985 751 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 TMEM39BQ9GZU3 492 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 RAB6CQ9H0N0 254 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 UPF2Q9HAU5 1272 aaKnown RBP4.72□□□□□ -1.65
DHFR-204ENST00000508282 EPB41L5Q9HCM4 733 aa4.72□□□□□ -1.65
DHFR-204ENST00000508282 MAP3K20Q9NYL2 800 aaKnown RBP4.72□□□□□ -1.65
DHFR-204ENST00000508282 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
DHFR-204ENST00000508282 TMEM184BQ9Y519 407 aaPredicted RBP4.72□□□□□ -1.65
DHFR-204ENST00000508282 CSF2RAP15509 400 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 NFKBIAP25963 317 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 GALCP54803 685 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 ACVR2BQ13705 512 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 CEP85LQ5SZL2 805 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 SLC35E4Q6ICL7 350 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 CCDC70Q6NSX1 233 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 DGLUCYQ7Z3D6 616 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 CCDC190Q86UF4 302 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 SLC5A8Q8N695 610 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 HJURPQ8NCD3 748 aaPredicted RBP4.71□□□□□ -1.66
DHFR-204ENST00000508282 TRPC4APQ8TEL6 797 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 AASSQ9UDR5 926 aa4.71□□□□□ -1.66
DHFR-204ENST00000508282 TDRD9Q8NDG6 1382 aaKnown RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 ANKRD66B4E2M5 251 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 SCAMP1O15126 338 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 EDIL3O43854 480 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 CGAP01215 116 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 CDH2P19022 906 aaPredicted RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 MCCP23508 829 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 NR2F2P24468 414 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 HRH2P25021 359 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 MLLT10P55197 1068 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 TFAP4Q01664 338 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 EIF4A2Q14240 407 aaKnown RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 WDR38Q5JTN6 314 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 GKAP1Q5VSY0 366 aaPredicted RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 SLC27A1Q6PCB7 646 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 CEACAM20Q6UY09 585 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 GCSAMQ8N6F7 178 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 OR10V1Q8NGI7 309 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 UCMAQ8WVF2 138 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 OXNAD1Q96HP4 312 aaPredicted RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 ABHD8Q96I13 439 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 F2RL3Q96RI0 385 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 GFI1Q99684 422 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 MUC13Q9H3R2 512 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 TRPC7Q9HCX4 862 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 DIAPH3Q9NSV4 1193 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 SETD4Q9NVD3 440 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 DDX43Q9NXZ2 648 aaKnown RBP4.7□□□□□ -1.66
DHFR-204ENST00000508282 B3GALT5Q9Y2C3 310 aa4.7□□□□□ -1.66
DHFR-204ENST00000508282 A0A0G2JNG1 304 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 A0A1W2PPI3 338 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 SMAD9O15198 467 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 BUD23O43709 281 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 RNASEH2AO75792 299 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 PDE9AO76083 593 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 MBD4O95243 580 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 DDX58O95786 925 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 APOHP02749 345 aaPredicted RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 LAMP2P13473 410 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 RARGP13631 454 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 SELLP14151 372 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 ANXA7P20073 488 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 MAN1A1P33908 653 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 CTSCP53634 463 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 ATP12AP54707 1039 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 MBTD1Q05BQ5 628 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 SPOCK1Q08629 439 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 KIR2DS3Q14952 304 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 KIR2DS5Q14953 304 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 CCDC6Q16204 474 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 WDR78Q5VTH9 848 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 SNX30Q5VWJ9 437 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 ARHGAP17Q68EM7 881 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 CLEC17AQ6ZS10 378 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 ANO5Q75V66 913 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 HACE1Q8IYU2 909 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 GBGT1Q8N5D6 347 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 PDILTQ8N807 584 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 FAM76AQ8TAV0 307 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 STAMBPL1Q96FJ0 436 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 C17orf77Q96MU5 243 aa4.69□□□□□ -1.66
DHFR-204ENST00000508282 OLA1Q9NTK5 396 aaKnown RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 CORO1CQ9ULV4 474 aaPredicted RBP4.69□□□□□ -1.66
DHFR-204ENST00000508282 ZNF217O75362 1048 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 HIST1H2ABP04908 130 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 TUBBP07437 444 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 INHBAP08476 426 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 HIST1H2ADP20671 130 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 CHMP24386 653 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 GPR143P51810 404 aa4.68□□□□□ -1.66
DHFR-204ENST00000508282 NR0B1P51843 470 aaKnown RBP4.68□□□□□ -1.66
DHFR-204ENST00000508282 HILS1P60008 231 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms