RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 EIF2B5Q13144 721 aaKnown RBP19.83■□□□□ 0.77
USP53-203ENST00000507597 NAB1Q13506 487 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 CCDC6Q16204 474 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 ALG11Q2TAA5 492 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 TRIM74Q86UV6 250 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 GKN2Q86XP6 184 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 TRAPPC5Q8IUR0 188 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 PIANPQ8IYJ0 282 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 TSACCQ96A04 125 aaPredicted RBP19.83■□□□□ 0.77
USP53-203ENST00000507597 OR2M4Q96R27 311 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 GSDMCQ9BYG8 508 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 LRRC4CQ9HCJ2 640 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 MOCS1Q9NZB8 636 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 GNPTGQ9UJJ9 305 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 FBXO5Q9UKT4 447 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 COMMD10Q9Y6G5 202 aa19.83■□□□□ 0.77
USP53-203ENST00000507597 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.83■□□□□ 0.77
USP53-203ENST00000507597 OAS3Q9Y6K5 1087 aaKnown RBP19.83■□□□□ 0.77
USP53-203ENST00000507597 CHUKO15111 745 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 FTH1P02794 183 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 ERVK-10P10266 1014 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 ALPPL2P10696 532 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 ZNF8P17098 575 aaPredicted RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 ARNTP27540 789 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 SSTR1P30872 391 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 CDKN1CP49918 316 aaPredicted RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 PMS2P54278 862 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 ADARP55265 1226 aaKnown RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 TYSND1Q2T9J0 566 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 TMEM220Q6QAJ8 160 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 PRR23CQ6ZRP0 262 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 MARK2Q7KZI7 788 aaKnown RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 GALNT7Q86SF2 657 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 SLC26A11Q86WA9 606 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 MINDY1Q8N5J2 469 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 OR1E3Q8WZA6 343 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 PANX3Q96QZ0 392 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 CDC42EP4Q9H3Q1 356 aaKnown RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 FGF22Q9HCT0 170 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 TMEM9BQ9NQ34 198 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.82■□□□□ 0.76
USP53-203ENST00000507597 TMPRSS11EQ9UL52 423 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 CORO1CQ9ULV4 474 aaPredicted RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 CSNK1G3Q9Y6M4 447 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 V9GYY5 206 aaPredicted RBP19.82■□□□□ 0.76
USP53-203ENST00000507597 SCN8AQ9UQD0 1980 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 GON4LQ3T8J9 2241 aa19.82■□□□□ 0.76
USP53-203ENST00000507597 UBA6A0AVT1 1052 aaPredicted RBP19.81■□□□□ 0.76
USP53-203ENST00000507597 GOLGA8KD6RF30 607 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 GOLGA8TH3BQL2 631 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 DNAJC6O75061 913 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 MTX2O75431 263 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 ERLIN1O75477 346 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 RPS3P23396 243 aaKnown RBP eCLIP19.81■□□□□ 0.76
USP53-203ENST00000507597 POLD2P49005 469 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 SLC14A1Q13336 389 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 KYNUQ16719 465 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 BCL7AQ4VC05 210 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 PYCR3Q53H96 274 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 PTRHD1Q6GMV3 140 aaKnown RBP19.81■□□□□ 0.76
USP53-203ENST00000507597 EMBQ6PCB8 327 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 CAPN12Q6ZSI9 719 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 CNTN4Q8IWV2 1026 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 CCDC77Q9BR77 488 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 TRIM56Q9BRZ2 755 aaKnown RBP19.81■□□□□ 0.76
USP53-203ENST00000507597 TIMM29Q9BSF4 260 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 EDEM2Q9BV94 578 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 DUSP23Q9BVJ7 150 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 PARD6BQ9BYG5 372 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 SMOC1Q9H4F8 434 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 ARFGAP3Q9NP61 516 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 PCDHGB2Q9Y5G2 931 aa19.81■□□□□ 0.76
USP53-203ENST00000507597 SDK1Q7Z5N4 2213 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 DOCK9Q9BZ29 2069 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 ZNF106Q9H2Y7 1883 aaKnown RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 A0A087WUV0 522 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 LNP1A1A4G5 178 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 KPNA5O15131 536 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 GPR39O43194 453 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 AQP9O43315 295 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 ESR1P03372 595 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 VSNL1P62760 191 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 BNC1Q01954 994 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 PLOD1Q02809 727 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 SF3A2Q15428 464 aaKnown RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 INSCQ1MX18 579 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 PRRT3Q5FWE3 981 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 TPRG1LQ5T0D9 272 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 TEDDM1Q5T9Z0 273 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 LVRNQ6Q4G3 990 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 KDM7AQ6ZMT4 941 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 CHST15Q7LFX5 561 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 AMZ2Q86W34 360 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 RASGEF1AQ8N9B8 481 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 C2CD4AQ8NCU7 369 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 LINC00615Q96LM1 132 aaPredicted RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 CYTH2Q99418 400 aa19.8■□□□□ 0.76
USP53-203ENST00000507597 WDR83Q9BRX9 315 aaKnown RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 MRPL40Q9NQ50 206 aaKnown RBP19.8■□□□□ 0.76
USP53-203ENST00000507597 TM7SF3Q9NS93 570 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms